Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

BARX1 2 datasets

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BRD4 1 dataset

ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 109 bp overlap

BSX 2 datasets

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 176 bp overlap

DLX1 2 datasets

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

DUX4 2 datasets

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Dlx2 2 datasets

Motif DE_48h DE_48h-Dlx2_MA0885.3 8 bp overlap

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 2 datasets

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 2 datasets

Motif DE_48h DE_48h-Dlx5_MA1476.3 8 bp overlap

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

EN2 2 datasets

Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap

Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 340 bp overlap

ESRRA 1 dataset

ChIP BT-474 GSE81651.ESRRA.BT-474 236 bp overlap

ESRRG 1 dataset

ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 412 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 522 bp overlap

ChIP DE DE-FOXA2-2 437 bp overlap

FOXB1 2 datasets

Motif DE_48h DE_48h-FOXB1_MA0845.1 11 bp overlap

Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap

Foxl2 2 datasets

Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap

Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 462 bp overlap

ChIP DE DE-GATA4-2 437 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 380 bp overlap

ChIP DE DE-GATA6-2 466 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 418 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 281 bp overlap

GBX1 2 datasets

Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap

Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap

GBX2 2 datasets

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

ISL2 2 datasets

Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap

Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap

LBX1 2 datasets

Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap

Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap

LBX2 2 datasets

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

LHX9 2 datasets

Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap

Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap

Lhx1 2 datasets

Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap

Motif DE_60h DE_60h-Lhx1_MA1518.3 10 bp overlap

MSX1 2 datasets

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Msx3 2 datasets

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NFIA 2 datasets

Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap

Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap

NFIX 2 datasets

Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap

Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap

Nobox 2 datasets

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

Nr2e3 1 dataset

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

ONECUT2 1 dataset

ChIP A-549 GSE102599.ONECUT2.A-549 269 bp overlap

PHOX2A 2 datasets

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap

PKNOX1 3 datasets

ChIP HEK293T ENCFF174WDB 391 bp overlap

ChIP HEK293T ENCFF174WDB 386 bp overlap

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 464 bp overlap

PLAGL2 2 datasets

Motif DE_48h DE_48h-PLAGL2_MA1548.2 8 bp overlap

Motif DE_60h DE_60h-PLAGL2_MA1548.2 8 bp overlap

POU2F2 2 datasets

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

PRDM1 1 dataset

Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap

PRRX2 2 datasets

Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap

Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap

RAD21 1 dataset

ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 84 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 408 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 382 bp overlap

RAX 2 datasets

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 389 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 240 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 348 bp overlap

SMARCC1 1 dataset

ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 308 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 387 bp overlap

TP53 2 datasets

Motif DE_48h DE_48h-TP53_MA0106.3 18 bp overlap

Motif DE_60h DE_60h-TP53_MA0106.3 18 bp overlap

ZNF214 1 dataset

Motif DE_48h DE_48h-ZNF214_MA1975.2 13 bp overlap

ZNF22 1 dataset

ChIP HEK293 GSE76494.ZNF22.HEK293 136 bp overlap

ZNF362 1 dataset

ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 217 bp overlap

ZNF384 2 datasets

ChIP HEK293T ENCFF019DZX 307 bp overlap

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 278 bp overlap

ZNF528 1 dataset

Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap

ZNF768 2 datasets

Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap

Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap

ZSCAN16 1 dataset

Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap

Genome Browser