chr12 : 75,809,817 – 75,810,037

220 bp 64 TFs 0 linked genes

This 220 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

64 transcription factors

ARGFX 1 dataset

Motif ES_0h ES_0h-ARGFX_MA1463.2 8 bp overlap

Arid3a 1 dataset

Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap

Arx 1 dataset

Motif ES_0h ES_0h-Arx_MA0874.2 10 bp overlap

BARX1 1 dataset

Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap

BRD4 7 datasets

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 185 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 220 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 208 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 220 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 220 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 211 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

BSX 1 dataset

Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 220 bp overlap

DLX1 1 dataset

Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap

Dmrt1 1 dataset

Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap

Dux 1 dataset

Motif ES_0h ES_0h-Dux_MA0611.3 11 bp overlap

ELL2 1 dataset

ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 184 bp overlap

ESR1 11 datasets

ChIP Ishikawa ENCSR000BIZ.ESR1.Ishikawa 220 bp overlap

ChIP Ishikawa GSE109891.ESR1.Ishikawa 163 bp overlap

ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 207 bp overlap

ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 205 bp overlap

ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 190 bp overlap

ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 205 bp overlap

ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 199 bp overlap

ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 220 bp overlap

ChIP T-47D ENCSR000BJS.ESR1.T-47D 201 bp overlap

ChIP T-47D ENCSR000BLL.ESR1.T-47D 197 bp overlap

ChIP T-47D ENCSR000BKN.ESR1.T-47D 136 bp overlap

ETV5::FOXO1 1 dataset

Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 124 bp overlap

GBX2 1 dataset

Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap

HESX1 1 dataset

Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap

HOXA7 1 dataset

Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap

Hmga1 1 dataset

Motif ES_0h ES_0h-Hmga1_MA2124.1 8 bp overlap

LBX2 1 dataset

Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 168 bp overlap

MED1 1 dataset

ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 188 bp overlap

MEF2A 1 dataset

Motif ES_0h ES_0h-MEF2A_MA0052.5 10 bp overlap

MEF2B 1 dataset

Motif ES_0h ES_0h-MEF2B_MA0660.1 12 bp overlap

MEF2C 1 dataset

Motif ES_0h ES_0h-MEF2C_MA0497.2 11 bp overlap

MEF2D 1 dataset

Motif ES_0h ES_0h-MEF2D_MA0773.1 12 bp overlap

MSX1 1 dataset

Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap

MXI1 3 datasets

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

ChIP H1 ENCFF963FZS 220 bp overlap

ChIP WA01 ENCSR000EBR.MXI1.WA01 147 bp overlap

MYNN 3 datasets

ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 140 bp overlap

ChIP K-562 ENCSR737LTZ.MYNN.K-562 220 bp overlap

ChIP K562 ENCFF399UNK 162 bp overlap

Msx3 1 dataset

Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 220 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 186 bp overlap

NFIL3 1 dataset

Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap

Nobox 1 dataset

Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap

PAX3 1 dataset

Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap

PAX7 1 dataset

ChIP H9_DOX GSE98976.PAX7.H9_DOX 176 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 220 bp overlap

PHOX2A 1 dataset

Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap

POU2F1::SOX2 1 dataset

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 136 bp overlap

POU5F1 4 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 220 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 220 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 220 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap

PROP1 1 dataset

Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap

Pax7 1 dataset

Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap

Pou5f1::Sox2 2 datasets

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RARA 1 dataset

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 157 bp overlap

RAX 1 dataset

Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap

RFX1 6 datasets

ChIP K-562 ENCSR968GIB.RFX1.K-562 220 bp overlap

ChIP K-562 ENCSR041AXL.RFX1.K-562 220 bp overlap

ChIP K562 ENCFF421AVO 219 bp overlap

ChIP K562 ENCFF809XVG 212 bp overlap

ChIP MCF-7 ENCFF782EZS 220 bp overlap

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 220 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 159 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 220 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 220 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 220 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 202 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 165 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 220 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 173 bp overlap

TBX1 1 dataset

Motif ES_0h ES_0h-TBX1_MA0805.1 8 bp overlap

ZIM3 1 dataset

ChIP HEK293 GSE76494.ZIM3.HEK293 54 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 132 bp overlap

ZNF184 1 dataset

Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap

ZNF354A 1 dataset

Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap

ZNF558 1 dataset

Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap