chr11 : 93,817,311 – 93,818,245
934 bp 53 TFs 1 linked gene
This 934 bp open chromatin element is linked to VSTM5 and is bound by 53 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
VSTM5 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,812,311 – 93,823,245
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
53 transcription factors
Source
Cell type
AR 25 datasets
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 482 bp overlap
ChIP DU145 GSE47987.AR.DU145 277 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 263 bp overlap
ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 224 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 233 bp overlap
ChIP MDA-MB-453_DHT GSE74069.AR.MDA-MB-453_DHT 195 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 201 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 173 bp overlap
ChIP PC-3 GSE54110.AR.PC-3 214 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 528 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 148 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 190 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 377 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 366 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 359 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 219 bp overlap
ChIP VCaP_R1881 GSE79128.AR.VCaP_R1881 388 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 129 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 276 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 338 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 445 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 403 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 445 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 412 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 297 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 329 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 172 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 170 bp overlap
EBF1 3 datasets
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP MUTUL GSE75503.EBF1.MUTUL 297 bp overlap
ChIP NALM-6 GSE126300.EBF1.NALM-6 234 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 208 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 180 bp overlap
ESR1 2 datasets
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 475 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 181 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 395 bp overlap
FOXA1 11 datasets
ChIP MCF-7 GSE81714.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 270 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 453 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 335 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 219 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 188 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 289 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 242 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 257 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 278 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 137 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 227 bp overlap
ChIP DE DE-FOXA2-1 909 bp overlap
ChIP DE DE-FOXA2-2 889 bp overlap
GATA3 2 datasets
ChIP MCF-7 ENCFF437NQS 371 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 172 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 233 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 353 bp overlap
ChIP DE DE-GATA4-1 860 bp overlap
ChIP DE DE-GATA4-2 896 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 840 bp overlap
ChIP DE DE-GATA6-2 803 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 313 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 310 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 361 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 773 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 442 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 162 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 281 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 233 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 234 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 195 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 114 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 158 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 164 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 361 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 216 bp overlap
NR3C1 5 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 107 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 288 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 558 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 384 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 59 bp overlap
PAF1 3 datasets
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 102 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 330 bp overlap
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 181 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 158 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 248 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 245 bp overlap
PGR 9 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 200 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 253 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 241 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 595 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 388 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 413 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 306 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 335 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 376 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 650 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 363 bp overlap
POLR2A 3 datasets
ChIP PFSK-1 ENCFF576NIT 217 bp overlap
ChIP Panc1 ENCFF290KAB 198 bp overlap
ChIP sigmoid colon ENCFF725QFT 153 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 253 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 325 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 307 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 236 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 304 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 320 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 643 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 297 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 726 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 293 bp overlap
SMAD3 1 dataset
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 259 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 152 bp overlap
SNAI2 1 dataset
ChIP PC-9_1DF GSE131687.SNAI2.PC-9_1DF 305 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 636 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 657 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 182 bp overlap
ChIP MOLT-4_SNS GSE89384.SUPT5H.MOLT-4_SNS 786 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 114 bp overlap
TEAD4 7 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 369 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 319 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 673 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 763 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 625 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 700 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 369 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 180 bp overlap
TFAP2C 4 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 219 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 175 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 171 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 155 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 312 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 201 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 317 bp overlap
YY1AP1 4 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 694 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 602 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 631 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 726 bp overlap
ZBTB44 1 dataset
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 298 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 174 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 421 bp overlap
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