chr9 : 5,519,248 5,519,428
180 bp 42 TFs 0 linked genes
This 180 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:5,514,248 – 5,524,428
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 85 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 180 bp overlap
BRD4 1 dataset
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 65 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 155 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 180 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 104 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 113 bp overlap
FOXM1 1 dataset
ChIP GM12878 ENCFF264DJE 130 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 158 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 180 bp overlap
ChIP GM12878 ENCFF918AID 50 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 71 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 125 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 146 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 157 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 100 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 119 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 180 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 180 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 180 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 150 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 91 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCFF259FWL 95 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 180 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 89 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 54 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 106 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 94 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF263VRI 171 bp overlap
ChIP GM12878 ENCFF412KAE 114 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU5F1 4 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 180 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 180 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 151 bp overlap
RELB 1 dataset
ChIP L1236 GSE63736.RELB.L1236 59 bp overlap
RUNX1 4 datasets
ChIP 697 GSE138031.RUNX1.697 66 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 99 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 52 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 106 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 110 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 180 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 103 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 167 bp overlap
YY1 1 dataset
ChIP NT2/D1 ENCFF999MII 87 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 124 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF331 1 dataset
Motif ES_0h ES_0h-ZNF331_MA1726.2 10 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap