chr1 : 169,121,591 169,121,956
365 bp 39 TFs 0 linked genes
This 365 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:169,116,591 – 169,126,956
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 118 bp overlap
CTCF 5 datasets
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 125 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 116 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 194 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 170 bp overlap
ESR1 7 datasets
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 202 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 118 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 198 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 279 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 214 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 321 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 322 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 143 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 162 bp overlap
ESRRA 8 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 365 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 365 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 365 bp overlap
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 272 bp overlap
ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 217 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 365 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 365 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 365 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 365 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 144 bp overlap
FOXA1 70 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 269 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 245 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 282 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 256 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 204 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 239 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 209 bp overlap
ChIP A1A3_Brg1KD_Dex GSE112491.FOXA1.A1A3_Brg1KD_Dex 96 bp overlap
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 95 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 272 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 275 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 149 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 211 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 194 bp overlap
ChIP LNCaP-C4-2B_DHT GSE40050.FOXA1.LNCaP-C4-2B_DHT 259 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 345 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 365 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 196 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 176 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 303 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 365 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 116 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 324 bp overlap
ChIP MCF-7 GSE80808.FOXA1.MCF-7 365 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 359 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 226 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 241 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 300 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 238 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 118 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 184 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 365 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 365 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 224 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 320 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 239 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 239 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 365 bp overlap
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 275 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 246 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 347 bp overlap
ChIP MCF-7_JC4695 GSE126004.FOXA1.MCF-7_JC4695 250 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 202 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 291 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 153 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 143 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 365 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 365 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 365 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 365 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 254 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 365 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 254 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 58 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 149 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 222 bp overlap
ChIP T47D-A1-2_EtOH GSE112491.FOXA1.T47D-A1-2_EtOH 65 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 365 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 365 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 365 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 365 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 304 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 248 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 214 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 74 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 182 bp overlap
ChIP liver ERP002306.FOXA1.liver 185 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 196 bp overlap
FOXA2 17 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 136 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 359 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 332 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 258 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 228 bp overlap
ChIP DE DE-FOXA2-1 365 bp overlap
ChIP DE DE-FOXA2-2 365 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP HepG2 ENCFF570ABM 128 bp overlap
ChIP HepG2 ENCFF894AYY 365 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 344 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 147 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 328 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 181 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 53 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 365 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 365 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 356 bp overlap
FOXF1 2 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 233 bp overlap
ChIP GIST48 GSE106624.FOXF1.GIST48 281 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 133 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 259 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 235 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 142 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 262 bp overlap
ChIP HepG2 ENCFF462ULY 365 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 341 bp overlap
ChIP DE DE-GATA4-2 365 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 359 bp overlap
ChIP DE DE-GATA6-2 365 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 193 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF854JLR 213 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 125 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 126 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 241 bp overlap
NR2F6 2 datasets
ChIP Hep-G2 ENCSR518WPL.NR2F6.Hep-G2 290 bp overlap
ChIP HepG2 ENCFF429VKC 365 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 152 bp overlap
NRIP1 3 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 330 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 143 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 102 bp overlap
POLR2A 2 datasets
ChIP GM18951 ENCFF079KKO 111 bp overlap
ChIP stomach ENCFF820WZN 245 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 334 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 91 bp overlap
RAD21 2 datasets
ChIP K562 ENCFF634XYR 324 bp overlap
ChIP MDM_-dNS1 GSE103477.RAD21.MDM_-dNS1 254 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 284 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 271 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 128 bp overlap
TBX2 2 datasets
ChIP HepG2 ENCFF811TLA 365 bp overlap
ChIP HepG2 ENCFF811TLA 227 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 304 bp overlap
ZNF275 1 dataset
ChIP HepG2 ENCFF015JKD 365 bp overlap
ZNF317 1 dataset
ChIP HepG2 ENCFF018ISP 314 bp overlap