chr8 : 93,823,868 – 93,824,161

293 bp 48 TFs 0 linked genes

This 293 bp open chromatin element has no linked target genes and is bound by 48 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 180 bp overlap

BRD4 3 datasets

ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 129 bp overlap

ChIP SW480 GSE73319.BRD4.SW480 163 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 193 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 288 bp overlap

Crx 1 dataset

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

Dmbx1 1 dataset

Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 147 bp overlap

ESR1 4 datasets

ChIP MCF-7 GSE48930.ESR1.MCF-7 193 bp overlap

ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 65 bp overlap

ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 65 bp overlap

ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 92 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap

FOXA1 1 dataset

ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 200 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 293 bp overlap

ChIP DE DE-FOXA2-2 293 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 293 bp overlap

ChIP DE DE-GATA4-2 293 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-1 293 bp overlap

ChIP DE DE-GATA6-2 293 bp overlap

GRHL1 1 dataset

Motif DE_60h DE_60h-GRHL1_MA0647.2 10 bp overlap

GRHL2 1 dataset

Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap

GSC 1 dataset

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

HNF4A 1 dataset

Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap

HNF4G 1 dataset

Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap

JUN 1 dataset

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

JUND 1 dataset

Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 267 bp overlap

MYOD1 4 datasets

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 199 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 251 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 168 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 191 bp overlap

MYOG 2 datasets

ChIP RH4 GSE83726.MYOG.RH4 269 bp overlap

ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 176 bp overlap

NEUROD1 1 dataset

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 255 bp overlap

NEUROG2 5 datasets

ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 293 bp overlap

ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 287 bp overlap

ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 282 bp overlap

ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 245 bp overlap

ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 209 bp overlap

NR1H4::RXRA 1 dataset

Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap

NR2F1 1 dataset

Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap

NR2F6 1 dataset

Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap

NR4A2::RXRA 1 dataset

Motif DE_60h DE_60h-NR4A2RXRA_MA1147.2 13 bp overlap

Nr2e1 1 dataset

Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap

ONECUT2 1 dataset

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 63 bp overlap

OTX1 1 dataset

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PHIP 1 dataset

ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 175 bp overlap

PITX1 1 dataset

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 280 bp overlap

RBPJ 1 dataset

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RHOXF1 1 dataset

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 167 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 293 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 237 bp overlap

SMAD2_3 2 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 293 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 259 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 207 bp overlap

SOX10 1 dataset

Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 293 bp overlap

STAT3 1 dataset

ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 110 bp overlap