chr8 : 91,034,348 – 91,034,867

519 bp 52 TFs 1 linked gene

This 519 bp open chromatin element is linked to PIP4P2 and is bound by 52 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
PIP4P2		6.0 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

AR 1 dataset

ChIP MCF-7 GSE48930.AR.MCF-7 158 bp overlap

ASCL1 1 dataset

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 252 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 461 bp overlap

BCL6B 1 dataset

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

BRD4 2 datasets

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 337 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 519 bp overlap

CBFB 1 dataset

ChIP WTC11 ENCFF113HIY 167 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 312 bp overlap

CTCF 2 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 218 bp overlap

ESR1 3 datasets

ChIP MCF-7 ENCFF004AKH 254 bp overlap

ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 307 bp overlap

ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 177 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

FOXA1 1 dataset

ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 279 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 188 bp overlap

INSM1 1 dataset

Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 289 bp overlap

MAFB 1 dataset

ChIP islet ERP004003.MAFB.islet 200 bp overlap

MAX 1 dataset

ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 154 bp overlap

MYOD1 1 dataset

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 276 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 478 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 260 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 378 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 244 bp overlap

NCOA2 1 dataset

ChIP MCF-7 ERP000901.NCOA2.MCF-7 239 bp overlap

NIPBL 1 dataset

ChIP hESC GSE64758.NIPBL.hESC 188 bp overlap

NRIP1 1 dataset

ChIP MCF-7 ERP005838.NRIP1.MCF-7 193 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 365 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 222 bp overlap

SMAD1 1 dataset

ChIP BG03 GSE36578.SMAD1.BG03 128 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 250 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 463 bp overlap

SMARCB1 3 datasets

ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 86 bp overlap

ChIP hiPSC GSE124903.SMARCB1.hiPSC 288 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 481 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 296 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 400 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 189 bp overlap

SNAI3 1 dataset

Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 311 bp overlap

SOX2 1 dataset

ChIP hESC GSE18292.SOX2.hESC 102 bp overlap

SP1 2 datasets

ChIP H1 ENCFF263FUH 321 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap

STAT3 1 dataset

ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 60 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 283 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap

TCF12 1 dataset

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 183 bp overlap

YY1AP1 1 dataset

ChIP MCF-7_E2 GSE125594.YY1AP1.MCF-7_E2 83 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZFX 1 dataset

ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 293 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 215 bp overlap

ZNF682 1 dataset

Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap

ZSCAN22 1 dataset

ChIP HEK293 GSE76494.ZSCAN22.HEK293 143 bp overlap

Zic1::Zic2 1 dataset

Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap

Zic2 1 dataset

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Zic3 1 dataset

Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap