chr8 : 86,615,746 – 86,616,170

424 bp 75 TFs 0 linked genes

This 424 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

75 transcription factors

ARNT::HIF1A 2 datasets

Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap

Motif DE_60h DE_60h-ARNTHIF1A_MA0259.2 5 bp overlap

BARX1 1 dataset

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BARX2 1 dataset

Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap

BCL6B 1 dataset

Motif DE_60h DE_60h-BCL6B_MA0731.1 17 bp overlap

BSX 1 dataset

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

DLX1 1 dataset

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx2 1 dataset

Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap

Dlx3 1 dataset

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

Dlx5 1 dataset

Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap

E2F7 1 dataset

Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap

EHF 2 datasets

Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap

Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap

ELF3 2 datasets

Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap

Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 159 bp overlap

ETV5::DRGX 1 dataset

Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap

Elf5 2 datasets

Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap

Motif DE_60h DE_60h-Elf5_MA0136.4 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 297 bp overlap

ChIP DE DE-FOXA2-2 314 bp overlap

FOXC1 1 dataset

Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap

FOXD2 1 dataset

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

FOXD3 1 dataset

Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap

FOXH1 1 dataset

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

Foxq1 1 dataset

Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap

GATA1 1 dataset

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 145 bp overlap

GATA2 1 dataset

Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 365 bp overlap

ChIP DE DE-GATA4-2 384 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 285 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 363 bp overlap

ChIP DE DE-GATA6-2 347 bp overlap

Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 244 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 343 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 280 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 276 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 407 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 280 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 374 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 363 bp overlap

GBX2 1 dataset

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

Gata3 1 dataset

Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap

HESX1 1 dataset

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HMGA2 1 dataset

ChIP WTC11 ENCFF535JLP 71 bp overlap

HOXA7 1 dataset

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

Hmx2 1 dataset

Motif DE_60h DE_60h-Hmx2_MA0897.2 15 bp overlap

IKZF2 2 datasets

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap

ISL2 1 dataset

Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap

LBX2 1 dataset

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

MGA::EVX1 1 dataset

Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap

MSX1 1 dataset

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Msx3 1 dataset

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NFIA 1 dataset

Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap

NFIC 1 dataset

Motif DE_60h DE_60h-NFIC_MA0161.3 7 bp overlap

NFIX 1 dataset

Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap

Nkx3-2 1 dataset

Motif DE_60h DE_60h-Nkx3-2_MA0122.4 10 bp overlap

Nobox 1 dataset

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 228 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 370 bp overlap

ONECUT2 3 datasets

Motif DE_48h DE_48h-ONECUT2_MA0756.3 8 bp overlap

Motif DE_60h DE_60h-ONECUT2_MA0756.3 8 bp overlap

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 224 bp overlap

PCBP2 2 datasets

ChIP Hep-G2 ENCSR945NSF.PCBP2.Hep-G2 192 bp overlap

ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 192 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 134 bp overlap

Pax7 1 dataset

Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap

RAX 1 dataset

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RBPJ 2 datasets

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

SIX1 2 datasets

Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap

Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 333 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 366 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 217 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 136 bp overlap

SOX14 1 dataset

Motif DE_60h DE_60h-SOX14_MA1562.2 9 bp overlap

SOX18 1 dataset

Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap

SOX9 2 datasets

Motif DE_48h DE_48h-SOX9_MA0077.2 8 bp overlap

Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap

SRY 1 dataset

Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap

Stat4 1 dataset

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

Stat5a 1 dataset

Motif DE_60h DE_60h-Stat5a_MA1624.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TP53 1 dataset

Motif DE_60h DE_60h-TP53_MA0106.3 18 bp overlap

TP63 1 dataset

ChIP BxPC-3 GSE115461.TP63.BxPC-3 218 bp overlap

TRPS1 1 dataset

Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap

VENTX 1 dataset

Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap

ZNF175 2 datasets

Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap

Motif DE_60h DE_60h-ZNF175_MA2332.1 9 bp overlap

ZNF449 2 datasets

Motif DE_48h DE_48h-ZNF449_MA1656.2 10 bp overlap

Motif DE_60h DE_60h-ZNF449_MA1656.2 10 bp overlap

ZNF680 1 dataset

Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap

ZNF823 1 dataset

ChIP HEK293T GSE78099.ZNF823.HEK293T 424 bp overlap

ZSCAN21 1 dataset

Motif DE_60h DE_60h-ZSCAN21_MA2336.1 7 bp overlap