Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

41 transcription factors

AR 1 dataset

ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 178 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 229 bp overlap

ATF2 1 dataset

ChIP K562 ENCFF139ZZG 55 bp overlap

ATF3 1 dataset

ChIP K-562 ENCSR028UIU.ATF3.K-562 56 bp overlap

ATF7 3 datasets

ChIP HepG2 ENCFF470FKK 51 bp overlap

ChIP MCF-7 ENCFF578WKB 267 bp overlap

ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 56 bp overlap

BRD4 2 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 180 bp overlap

ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 694 bp overlap

CREB3L1 1 dataset

Motif DE_36h DE_36h-CREB3L1_MA0839.2 13 bp overlap

CTCF 3 datasets

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 210 bp overlap

ChIP endodermal cell ENCFF471YCZ 394 bp overlap

ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 192 bp overlap

DPF2 1 dataset

ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 220 bp overlap

E2F1 1 dataset

ChIP HeLa-S3 ENCSR000EVM.E2F1.HeLa-S3 125 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 458 bp overlap

ChIP hESC GSE26097.EOMES.hESC 153 bp overlap

EZH2 3 datasets

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 219 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 265 bp overlap

ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap

FOXA1 2 datasets

ChIP MCF-7 ENCFF465LTH 336 bp overlap

ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 208 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 953 bp overlap

ChIP DE DE-FOXA2-2 953 bp overlap

GATA3 2 datasets

ChIP MCF-7 ENCFF352QVM 398 bp overlap

ChIP MCF-7 ENCFF437NQS 371 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 891 bp overlap

ChIP DE DE-GATA4-2 953 bp overlap

ChIP foregut GSE117136.GATA4.foregut 352 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 396 bp overlap

ChIP DE DE-GATA6-1 378 bp overlap

ChIP DE DE-GATA6-2 929 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 953 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 953 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 953 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 466 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 307 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 953 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 953 bp overlap

ChIP foregut GSE117136.GATA6.foregut 308 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 439 bp overlap

INSM1 1 dataset

Motif DE_36h DE_36h-INSM1_MA0155.1 12 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 953 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 439 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 953 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 953 bp overlap

POU2F1 1 dataset

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

POU2F3 1 dataset

Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap

POU3F4 1 dataset

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

POU5F1 1 dataset

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

POU5F1B 1 dataset

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 776 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 953 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 953 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 953 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 425 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 309 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 920 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 588 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 192 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 501 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 135 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 281 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 279 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 616 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 201 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 304 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 414 bp overlap

TBX19 1 dataset

Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap

TBXT 1 dataset

Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap

TEAD4 1 dataset

ChIP MCF-7 ENCFF710WPA 269 bp overlap

TRIM22 1 dataset

ChIP MCF-7 ENCFF596XRL 371 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

ZNF582 1 dataset

Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Znf423 1 dataset

Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap

Genome Browser