Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

ATOH7 1 dataset

Motif DE_36h DE_36h-ATOH7_MA1468.1 10 bp overlap

BCL6 1 dataset

ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 312 bp overlap

CBFA2T3 2 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 272 bp overlap

ChIP K562 ENCFF673OEZ 411 bp overlap

CDX2 1 dataset

ChIP LS180 GSE31939.CDX2.LS180 244 bp overlap

CREB1 3 datasets

ChIP MCF-7 ENCFF341ZEM 417 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 398 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 474 bp overlap

CTCF 2 datasets

ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 105 bp overlap

ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 166 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 300 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 355 bp overlap

EP300 3 datasets

ChIP neural ENCSR843ZUP.EP300.neural 471 bp overlap

ChIP neural cell ENCFF442QNK 482 bp overlap

ChIP neural cell ENCFF442QNK 280 bp overlap

ERG 3 datasets

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 134 bp overlap

ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 170 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 136 bp overlap

EZH2 1 dataset

ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 98 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 472 bp overlap

ChIP DE DE-FOXA2-2 382 bp overlap

GATA1 1 dataset

ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 224 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 251 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 465 bp overlap

ChIP DE DE-GATA4-2 640 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 427 bp overlap

ChIP DE DE-GATA6-2 526 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 476 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 606 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 467 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 625 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 639 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 499 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 547 bp overlap

HDAC1 1 dataset

ChIP K-562 ENCSR387UWP.HDAC1.K-562 251 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 428 bp overlap

KDM1A 3 datasets

ChIP K-562 ENCSR360HRA.KDM1A.K-562 351 bp overlap

ChIP K-562 ENCSR908CMW.KDM1A.K-562 257 bp overlap

ChIP K562 ENCFF133OLU 399 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MEIS2 1 dataset

ChIP K-562 ENCSR851BNE.MEIS2.K-562 242 bp overlap

MXI1 1 dataset

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

Msgn1 1 dataset

Motif DE_36h DE_36h-Msgn1_MA1524.3 10 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 252 bp overlap

NEUROG1 1 dataset

Motif DE_36h DE_36h-NEUROG1_MA0623.2 10 bp overlap

NEUROG2 1 dataset

Motif DE_36h DE_36h-NEUROG2_MA0669.1 10 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 457 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 119 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 187 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 706 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 618 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 432 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 406 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 500 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 299 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 553 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 760 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 155 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 328 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 422 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 299 bp overlap

SOX6 1 dataset

ChIP K-562 ENCSR788RSW.SOX6.K-562 288 bp overlap

SPI1 1 dataset

ChIP U-937 GSE128834.SPI1.U-937 170 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap

TAL1 3 datasets

ChIP CHRF28811 ERP008568.TAL1.CHRF28811 232 bp overlap

ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 151 bp overlap

ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 217 bp overlap

TCF21 1 dataset

Motif DE_36h DE_36h-TCF21_MA1568.2 10 bp overlap

TEAD4 1 dataset

Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap

TFAP4 1 dataset

Motif DE_36h DE_36h-TFAP4_MA1570.1 10 bp overlap

ZNF157 1 dataset

Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap

ZNF19 1 dataset

ChIP HEK293T GSE78099.ZNF19.HEK293T 218 bp overlap

ZNF24 1 dataset

Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap

Genome Browser