chr8 : 56,321,055 56,321,901
846 bp 36 TFs 1 linked gene
This 846 bp open chromatin element is linked to SDR16C5 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SDR16C5 880 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:56,316,055 – 56,326,901
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 328 bp overlap
CTCF 5 datasets
ChIP H9 ENCFF152GTF 360 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 134 bp overlap
ChIP HCT116 ENCFF209YMI 228 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 198 bp overlap
ChIP endodermal cell ENCFF471YCZ 216 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 355 bp overlap
ChIP BLaER1 ENCFF262VBH 354 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 157 bp overlap
ESR1 3 datasets
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 386 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 463 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 285 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 372 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 245 bp overlap
ChIP Pfeiffer GSE45982.EZH2.Pfeiffer 208 bp overlap
ChIP RL GSE134136.EZH2.RL 226 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 330 bp overlap
JUN 1 dataset
ChIP Karpas-299 GSE151413.JUN.Karpas-299 477 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 158 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 302 bp overlap
MLLT3 1 dataset
ChIP THP-1 GSE79899.MLLT3.THP-1 195 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 241 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 312 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 658 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 285 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 138 bp overlap
RELA 1 dataset
ChIP KB GSE52469.RELA.KB 146 bp overlap
REST 1 dataset
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 368 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 450 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 698 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 621 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 423 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 395 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 196 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 165 bp overlap
STAT3 1 dataset
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 822 bp overlap
SUZ12 2 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 489 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 366 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 169 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 216 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 103 bp overlap
TOP2A 1 dataset
ChIP KG-1_etoposide GSE114048.TOP2A.KG-1_etoposide 101 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap