Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

AR 1 dataset

ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 159 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 294 bp overlap

BRD2 1 dataset

ChIP MV4-11_IBET151_50nM GSE120715.BRD2.MV4-11_IBET151_50nM 151 bp overlap

BRD4 10 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 265 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 371 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 342 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 371 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 371 bp overlap

ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 299 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 241 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 205 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 294 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 369 bp overlap

CTCF 3 datasets

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 267 bp overlap

ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 176 bp overlap

ChIP neural cell ENCFF335ADI 371 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF680YXW 251 bp overlap

E2F1 2 datasets

ChIP HeLa GSE22478.E2F1.HeLa 193 bp overlap

ChIP MM1-S GSE80661.E2F1.MM1-S 247 bp overlap

EBF1 1 dataset

ChIP ASC GSE54889.EBF1.ASC 150 bp overlap

EP300 1 dataset

ChIP neural cell ENCFF442QNK 371 bp overlap

ESR1 1 dataset

ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 203 bp overlap

EZH2 5 datasets

ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 101 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 265 bp overlap

ChIP neural progenitor cell ENCFF018MKA 318 bp overlap

ChIP neural progenitor cell ENCFF018MKA 371 bp overlap

FOXA1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 219 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 308 bp overlap

ChIP DE DE-FOXA2-2 308 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 196 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 251 bp overlap

GATA6 1 dataset

ChIP DE DE-GATA6-2 272 bp overlap

KDM1A 1 dataset

ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 220 bp overlap

MAX 3 datasets

ChIP NCI-H128 GSE41105.MAX.NCI-H128 253 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 292 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 366 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 173 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 155 bp overlap

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 180 bp overlap

NANOG 1 dataset

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 181 bp overlap

NR3C1 1 dataset

ChIP A-549 ENCSR000BHF.NR3C1.A-549 160 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 250 bp overlap

PAX6 1 dataset

ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 363 bp overlap

PDX1 3 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 371 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap

ChIP islet ERP001456.PDX1.islet 244 bp overlap

POLR2A 2 datasets

ChIP body of pancreas ENCFF675RCN 234 bp overlap

ChIP neural cell ENCFF604SPB 113 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 72 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 157 bp overlap

RAD21 3 datasets

ChIP HAP1 GSE126634.RAD21.HAP1 282 bp overlap

ChIP HAP1 GSE152721.RAD21.HAP1 320 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 290 bp overlap

REST 3 datasets

ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 266 bp overlap

ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 341 bp overlap

ChIP neural ENCSR000BTV.REST.neural 160 bp overlap

SMARCA4 2 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 157 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 371 bp overlap

SMC3 1 dataset

ChIP neural cell ENCFF795YGY 371 bp overlap

SOX2 5 datasets

ChIP HNSC GSE69479.SOX2.HNSC 371 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 180 bp overlap

ChIP NPC GSE122631.SOX2.NPC 196 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 238 bp overlap

ChIP hiPSC GSE67282.SOX2.hiPSC 202 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 365 bp overlap

SOX6 1 dataset

ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 291 bp overlap

Genome Browser