Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

ARNT 1 dataset

ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 51 bp overlap

BRD2 1 dataset

ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 118 bp overlap

BRD4 7 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 187 bp overlap

ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 381 bp overlap

ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 213 bp overlap

ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 61 bp overlap

ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 52 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 163 bp overlap

ChIP keratinocyte GSE140992.BRD4.keratinocyte 440 bp overlap

CDK8 3 datasets

ChIP MOLM-14 GSE65138.CDK8.MOLM-14 270 bp overlap

ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 306 bp overlap

ChIP SET-2 GSE65138.CDK8.SET-2 90 bp overlap

CEBPA 1 dataset

ChIP MV4-11 GSE88746.CEBPA.MV4-11 60 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 176 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 209 bp overlap

EED 1 dataset

ChIP GM12878 ENCFF266FYW 54 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 253 bp overlap

ERG 2 datasets

ChIP ME-1 GSE46044.ERG.ME-1 146 bp overlap

ChIP SEM GSE117864.ERG.SEM 93 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 383 bp overlap

ChIP DE DE-FOXA2-2 315 bp overlap

FOXO1 1 dataset

ChIP CD34 GSE80773.FOXO1.CD34 59 bp overlap

GATA1 1 dataset

ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 78 bp overlap

GATA2 2 datasets

ChIP SKH1 GSE87283.GATA2.SKH1 50 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 254 bp overlap

GATA3 1 dataset

ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 440 bp overlap

ChIP DE DE-GATA4-2 402 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 401 bp overlap

ChIP DE DE-GATA6-2 399 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 440 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 440 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 440 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 345 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 440 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 440 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 394 bp overlap

ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 266 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 91 bp overlap

IKZF2 2 datasets

ChIP GM12878 ENCFF238LYK 67 bp overlap

ChIP GM12878 ENCFF918AID 110 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 397 bp overlap

ChIP DE_D1 S13-DE-d1-JUN-exp1 366 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 433 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 440 bp overlap

MED 1 dataset

ChIP SEM GSE83671.MED.SEM 247 bp overlap

MEF2B 1 dataset

ChIP tonsil GSE110682.MEF2B.tonsil 83 bp overlap

MYCN 3 datasets

ChIP CHP-134 GSE129588.MYCN.CHP-134 215 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 285 bp overlap

ChIP NGP GSE80151.MYCN.NGP 196 bp overlap

MYOD1 2 datasets

ChIP RH4 GSE83726.MYOD1.RH4 92 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 114 bp overlap

NR3C1 1 dataset

ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 59 bp overlap

PITX3 1 dataset

ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 270 bp overlap

RAD21 3 datasets

ChIP CHRF28811 ERP008568.RAD21.CHRF28811 58 bp overlap

ChIP RH4 GSE83726.RAD21.RH4 65 bp overlap

ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 90 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 343 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 439 bp overlap

RELA 1 dataset

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 71 bp overlap

RUNX1 2 datasets

ChIP NB4 GSE81992.RUNX1.NB4 89 bp overlap

ChIP SKH1 GSE87283.RUNX1.SKH1 50 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 440 bp overlap

SMAD2-3 3 datasets

ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 65 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 440 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 440 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 440 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 440 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 397 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 352 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 314 bp overlap

SMARCA4 1 dataset

ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 292 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 316 bp overlap

ChIP SYO-1 GSE108025.SMARCC1.SYO-1 219 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 207 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 274 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 405 bp overlap

SS18 2 datasets

ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 381 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 412 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 258 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 310 bp overlap

TCF3 2 datasets

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 73 bp overlap

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 66 bp overlap

TP63 1 dataset

ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 71 bp overlap

TSHZ2 1 dataset

ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 154 bp overlap

Genome Browser