Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

ATF7 1 dataset

ChIP GM12878 ENCSR014YCR.ATF7.GM12878 269 bp overlap

BARX1 2 datasets

Motif DE_24h DE_24h-BARX1_MA0875.2 6 bp overlap

Motif DE_36h DE_36h-BARX1_MA0875.2 6 bp overlap

BRD4 1 dataset

ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 169 bp overlap

BSX 2 datasets

Motif DE_24h DE_24h-BSX_MA0876.2 6 bp overlap

Motif DE_36h DE_36h-BSX_MA0876.2 6 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 201 bp overlap

CTCF 1 dataset

Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap

DLX1 2 datasets

Motif DE_24h DE_24h-DLX1_MA0879.3 6 bp overlap

Motif DE_36h DE_36h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_24h DE_24h-DLX6_MA0882.2 6 bp overlap

Motif DE_36h DE_36h-DLX6_MA0882.2 6 bp overlap

Dlx3 2 datasets

Motif DE_24h DE_24h-Dlx3_MA0880.2 6 bp overlap

Motif DE_36h DE_36h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_24h DE_24h-Dlx4_MA0881.2 6 bp overlap

Motif DE_36h DE_36h-Dlx4_MA0881.2 6 bp overlap

EGR1 3 datasets

Motif DE_24h DE_24h-EGR1_MA0162.5 10 bp overlap

ChIP K-562 ENCSR000BNE.EGR1.K-562 149 bp overlap

ChIP K562 ENCFF006PJY 204 bp overlap

EGR3 1 dataset

Motif DE_24h DE_24h-EGR3_MA0732.2 11 bp overlap

EGR4 1 dataset

Motif DE_24h DE_24h-EGR4_MA0733.2 11 bp overlap

ELF3 1 dataset

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 100 bp overlap

EN2 2 datasets

Motif DE_24h DE_24h-EN2_MA0642.3 7 bp overlap

Motif DE_36h DE_36h-EN2_MA0642.3 7 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 297 bp overlap

EZH2 4 datasets

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 274 bp overlap

ChIP HeLa-S3 ENCFF318LHU 325 bp overlap

ChIP SK-N-MC ENCFF434OHW 198 bp overlap

ChIP T98G GSE112240.EZH2.T98G 244 bp overlap

GATA6 3 datasets

ChIP DE_D2 S55-DE-d2-GATA6-exp2 270 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 226 bp overlap

GBX1 2 datasets

Motif DE_24h DE_24h-GBX1_MA0889.2 7 bp overlap

Motif DE_36h DE_36h-GBX1_MA0889.2 7 bp overlap

GBX2 2 datasets

Motif DE_24h DE_24h-GBX2_MA0890.2 6 bp overlap

Motif DE_36h DE_36h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_24h DE_24h-HESX1_MA0894.2 6 bp overlap

Motif DE_36h DE_36h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_24h DE_24h-HOXA7_MA1498.3 6 bp overlap

Motif DE_36h DE_36h-HOXA7_MA1498.3 6 bp overlap

Irf1 1 dataset

Motif DE_24h DE_24h-Irf1_MA0050.4 11 bp overlap

JUN 3 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 333 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 224 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 350 bp overlap

LBX1 2 datasets

Motif DE_24h DE_24h-LBX1_MA0618.2 7 bp overlap

Motif DE_36h DE_36h-LBX1_MA0618.2 7 bp overlap

LBX2 2 datasets

Motif DE_24h DE_24h-LBX2_MA0699.2 6 bp overlap

Motif DE_36h DE_36h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_24h DE_24h-LHX2_MA0700.3 6 bp overlap

Motif DE_36h DE_36h-LHX2_MA0700.3 6 bp overlap

LHX9 2 datasets

Motif DE_24h DE_24h-LHX9_MA0701.3 7 bp overlap

Motif DE_36h DE_36h-LHX9_MA0701.3 7 bp overlap

MLLT1 1 dataset

ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 350 bp overlap

MSX1 2 datasets

Motif DE_24h DE_24h-MSX1_MA0666.3 6 bp overlap

Motif DE_36h DE_36h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_24h DE_24h-MSX2_MA0708.3 6 bp overlap

Motif DE_36h DE_36h-MSX2_MA0708.3 6 bp overlap

MXI1 2 datasets

Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

Mecom 2 datasets

Motif DE_24h DE_24h-Mecom_MA0029.2 11 bp overlap

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

Msx3 2 datasets

Motif DE_24h DE_24h-Msx3_MA0709.2 6 bp overlap

Motif DE_36h DE_36h-Msx3_MA0709.2 6 bp overlap

NBN 1 dataset

ChIP GM12878 ENCSR278SQL.NBN.GM12878 264 bp overlap

Nobox 2 datasets

Motif DE_24h DE_24h-Nobox_MA0125.2 6 bp overlap

Motif DE_36h DE_36h-Nobox_MA0125.2 6 bp overlap

PBX3 1 dataset

ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap

PKNOX1 1 dataset

ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 283 bp overlap

PRRX2 2 datasets

Motif DE_24h DE_24h-PRRX2_MA0075.4 7 bp overlap

Motif DE_36h DE_36h-PRRX2_MA0075.4 7 bp overlap

RAX 2 datasets

Motif DE_24h DE_24h-RAX_MA0718.2 6 bp overlap

Motif DE_36h DE_36h-RAX_MA0718.2 6 bp overlap

RBPJ 1 dataset

ChIP NHEK GSE29498.RBPJ.NHEK 264 bp overlap

SMAD2 1 dataset

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 333 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 350 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 350 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 350 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 350 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 350 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 350 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 188 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 280 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 53 bp overlap

SP1 1 dataset

Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap

Stat2 1 dataset

Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 247 bp overlap

TBX21 2 datasets

ChIP GM12878 ENCFF951HUW 350 bp overlap

ChIP GM12878 ENCSR739IHN.TBX21.GM12878 350 bp overlap

TEAD1 1 dataset

Motif DE_24h DE_24h-TEAD1_MA0090.4 9 bp overlap

Wt1 1 dataset

Motif DE_24h DE_24h-Wt1_MA1627.2 10 bp overlap

ZNF140 1 dataset

Motif DE_24h DE_24h-ZNF140_MA1589.2 19 bp overlap

ZNF282 1 dataset

Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap

ZNF687 1 dataset

ChIP GM12878 ENCFF233SGE 350 bp overlap

ZNF740 1 dataset

Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap

Genome Browser