chr7 : 114,155,236 – 114,156,714
1,478 bp 55 TFs 0 linked genes
This 1.5 kb open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:114,150,236 – 114,161,714
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP RH4 GSE83726.BRD4.RH4 707 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 655 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 137 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 469 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 127 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 471 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 213 bp overlap
DMRTA1 3 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_36h DE_36h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_48h DE_48h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 3 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 96 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 301 bp overlap
ChIP DE DE-FOXA2-2 267 bp overlap
FOXO1-PAX3 3 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 203 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 183 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 505 bp overlap
GATA1::TAL1 2 datasets
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 1 dataset
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 475 bp overlap
ChIP DE DE-GATA4-2 510 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 468 bp overlap
ChIP DE DE-GATA6-2 580 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 556 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 511 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 567 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 273 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 669 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 563 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 432 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 557 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 669 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
Gata3 1 dataset
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
HAND2 3 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
HDAC2 3 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 249 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 107 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 342 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 433 bp overlap
IRF4 2 datasets
Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap
Motif DE_48h DE_48h-IRF4_MA1419.2 14 bp overlap
IRF5 2 datasets
Motif DE_36h DE_36h-IRF5_MA1420.1 14 bp overlap
Motif DE_48h DE_48h-IRF5_MA1420.1 14 bp overlap
IRF8 2 datasets
Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap
Motif DE_48h DE_48h-IRF8_MA0652.2 13 bp overlap
MITF 2 datasets
ChIP 501-mel GSE137522.MITF.501-mel 293 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 274 bp overlap
MTA2 2 datasets
ChIP RH4 GSE155861.MTA2.RH4 129 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 427 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 103 bp overlap
MYOG 4 datasets
ChIP RH4 GSE83726.MYOG.RH4 538 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 228 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 568 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 123 bp overlap
Mecom 1 dataset
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 327 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 152 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 253 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_36h DE_36h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F2 2 datasets
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 476 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 510 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 353 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 113 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 173 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_36h DE_36h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_48h DE_48h-Pou5f1Sox2_MA0142.1 15 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 178 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 533 bp overlap
RORC 1 dataset
Motif DE_48h DE_48h-RORC_MA1151.2 10 bp overlap
SIX2 2 datasets
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 336 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 253 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 387 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 342 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 331 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 382 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 463 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 179 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 185 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 295 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 299 bp overlap
SOX8 2 datasets
ChIP RH4 GSE116344.SOX8.RH4 410 bp overlap
ChIP RH4 GSE116344.SOX8.RH4 237 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 298 bp overlap
TRPS1 1 dataset
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 210 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 875 bp overlap
ZKSCAN1 3 datasets
Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_48h DE_48h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF331 2 datasets
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
Motif DE_48h DE_48h-ZNF331_MA1726.2 10 bp overlap
ZNF416 1 dataset
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 171 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_48h DE_48h-Zic2_MA1629.2 9 bp overlap
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