chr7 : 33,945,850 – 33,946,487

637 bp 74 TFs 2 linked genes

This 637 bp open chromatin element is linked to BMPER and ENSG00000236212 and is bound by 74 transcription factors.

Linked Genes

2 genes

Gene	Expression	Dist. to TSS	Distance	Link type
BMPER		40.7 kb	Distal	Multiome
ENSG00000236212		263.2 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

ATF3 1 dataset

ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 53 bp overlap

ATF4 1 dataset

Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap

BARX1 1 dataset

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

BSX 1 dataset

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

CEBPG 1 dataset

Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 382 bp overlap

Crx 1 dataset

Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap

DLX1 1 dataset

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

DLX6 1 dataset

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

DUX4 1 dataset

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

DUXA 1 dataset

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

Dlx3 1 dataset

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Dlx4 1 dataset

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Dmbx1 1 dataset

Motif DE_36h DE_36h-Dmbx1_MA0883.2 10 bp overlap

Dux 1 dataset

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 137 bp overlap

ETV2::DRGX 1 dataset

Motif DE_48h DE_48h-ETV2DRGX_MA1940.2 12 bp overlap

ETV5::DRGX 1 dataset

Motif DE_48h DE_48h-ETV5DRGX_MA1944.2 12 bp overlap

EWSR1-FLI1 2 datasets

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

FLI1::DRGX 1 dataset

Motif DE_48h DE_48h-FLI1DRGX_MA1949.2 14 bp overlap

FOS 4 datasets

Motif DE_48h DE_48h-FOS_MA0476.2 8 bp overlap

ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 59 bp overlap

ChIP MCF-7 ENCFF282FWZ 218 bp overlap

ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 119 bp overlap

FOSL1 2 datasets

ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 77 bp overlap

ChIP HCT116 ENCFF540ZXN 179 bp overlap

FOSL1::JUND 1 dataset

Motif DE_48h DE_48h-FOSL1JUND_MA1142.2 8 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 450 bp overlap

ChIP DE DE-FOXA2-2 589 bp overlap

GATA2 1 dataset

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 616 bp overlap

ChIP DE DE-GATA4-2 637 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

ChIP foregut GSE117136.GATA4.foregut 280 bp overlap

GATA5 1 dataset

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 462 bp overlap

ChIP DE DE-GATA6-2 637 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 586 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 457 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 637 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 602 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 577 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 637 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 467 bp overlap

GBX2 1 dataset

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

GLIS3 1 dataset

Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap

GSC 1 dataset

Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

HESX1 1 dataset

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

HIC2 1 dataset

Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap

HOXA7 1 dataset

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

HOXD12::ELK1 1 dataset

Motif DE_48h DE_48h-HOXD12ELK1_MA1958.2 13 bp overlap

JUN 3 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap

ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 130 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 228 bp overlap

Jun 1 dataset

Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap

LBX2 1 dataset

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

LHX2 1 dataset

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

MAML1 1 dataset

ChIP SCC_4h GSE156486.MAML1.SCC_4h 239 bp overlap

MSX1 1 dataset

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

MSX2 1 dataset

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

MXI1 1 dataset

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

Mecom 1 dataset

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

Msx3 1 dataset

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

Nobox 1 dataset

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

OTX1 1 dataset

Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap

PHOX2A 1 dataset

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

PITX1 1 dataset

Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap

PITX3 1 dataset

Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap

PKNOX1 2 datasets

ChIP MCF-7 ENCFF116OCS 69 bp overlap

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 135 bp overlap

PROP1 1 dataset

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

Pax7 1 dataset

Motif DE_48h DE_48h-Pax7_MA0680.3 10 bp overlap

RAX 1 dataset

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

RBPJ 4 datasets

Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

ChIP SCC_0h GSE156486.RBPJ.SCC_0h 87 bp overlap

ChIP SCC_4h GSE156486.RBPJ.SCC_4h 201 bp overlap

RCOR1 1 dataset

ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 89 bp overlap

RHOXF1 1 dataset

Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 585 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 381 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 372 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 346 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 391 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 540 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 428 bp overlap

SMAD3 1 dataset

ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 64 bp overlap

SMC1A 1 dataset

ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 54 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 236 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

USF1 1 dataset

Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap

VEZF1 1 dataset

Motif DE_48h DE_48h-VEZF1_MA1578.2 6 bp overlap

ZFX 1 dataset

ChIP MCF-7 ENCFF009NAJ 575 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 284 bp overlap

ZNF528 1 dataset

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

ZNF530 1 dataset

Motif DE_36h DE_36h-ZNF530_MA1981.2 14 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap