chr6 : 156,390,960 156,391,347
387 bp 34 TFs 2 linked genes
This 387 bp open chromatin element is linked to ENSG00000289830 and ENSG00000287092 and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000289830 6.0 kb Proximal Proximity
ENSG00000287092 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:156,385,960 – 156,396,347
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 139 bp overlap
ARNT 1 dataset
ChIP T-47D GSE130989.ARNT.T-47D 245 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 156 bp overlap
BRD4 5 datasets
ChIP 402-91 GSE111253.BRD4.402-91 361 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 387 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 202 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 341 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CTCF 8 datasets
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 69 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 118 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 80 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 237 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 165 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 223 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 194 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 145 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 327 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 387 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 306 bp overlap
ESR1 9 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 126 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 387 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 179 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 214 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 253 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 253 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 84 bp overlap
ChIP MCF-7_TNFa_45m GSE67295.ESR1.MCF-7_TNFa_45m 70 bp overlap
ChIP MCF-7_jc5852 GSE126004.ESR1.MCF-7_jc5852 95 bp overlap
EZH2 2 datasets
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 51 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 241 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 112 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 387 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 276 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 65 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 80 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 172 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 336 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 238 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 239 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 387 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 387 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 278 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 206 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 182 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 226 bp overlap
RAD21 6 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 76 bp overlap
ChIP SK-N-SH ENCFF747MAS 60 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 127 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 244 bp overlap
ChIP neural cell ENCFF564MOT 313 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 174 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 166 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 313 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 308 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 227 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 293 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 178 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 164 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 325 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 325 bp overlap