chr6 : 139,538,181 139,538,817
636 bp 40 TFs 1 linked gene
This 636 bp open chromatin element is linked to ENSG00000226571 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000226571 3.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:139,533,181 – 139,543,817
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 191 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 544 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 300 bp overlap
BRD4 4 datasets
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 308 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 231 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 301 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 124 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 206 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 378 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 321 bp overlap
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 195 bp overlap
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.EP300.pulmonary-artery_endothelial-cell_siPFKFB3 294 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 251 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 162 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 170 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 299 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 260 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 112 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 372 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 239 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 566 bp overlap
ChIP DE DE-FOXA2-2 636 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 495 bp overlap
ChIP DE DE-GATA4-2 532 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 342 bp overlap
ChIP DE DE-GATA6-2 434 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 255 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 283 bp overlap
JUN 3 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 586 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 297 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 303 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 271 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 301 bp overlap
MAX 1 dataset
ChIP endothelial cell of umbilical vein ENCFF100YIN 241 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 450 bp overlap
MYC 1 dataset
ChIP endothelial_umbilical-vein ENCSR000DLU.MYC.endothelial_umbilical-vein 225 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 114 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 366 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 242 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 419 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 166 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 322 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 276 bp overlap
RELA 18 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 169 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 144 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 169 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 249 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 172 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 264 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 272 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 187 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 297 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 275 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 298 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 333 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 291 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 289 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 197 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 236 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 221 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 277 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 530 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 418 bp overlap
SMARCA4 2 datasets
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 230 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 188 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 512 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 205 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 473 bp overlap
STAG1 1 dataset
ChIP HCAEC GSE101921.STAG1.HCAEC 293 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 163 bp overlap
TFEB 1 dataset
ChIP HUVEC-C GSE88894.TFEB.HUVEC-C 291 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 167 bp overlap