chr6 : 125,963,192 125,963,384
192 bp 42 TFs 1 linked gene
This 192 bp open chromatin element is linked to HINT3 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HINT3 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:125,958,192 – 125,968,384
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 192 bp overlap
ChIP K562 ENCFF938UXQ 192 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 192 bp overlap
ChIP K562 ENCFF673OEZ 103 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 136 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 164 bp overlap
ChIP K562 ENCFF403WPG 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 104 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 192 bp overlap
EGR1 2 datasets
ChIP liver ENCFF130MBW 128 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 58 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 144 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 192 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 87 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 192 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 192 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 182 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 136 bp overlap
GATA2 7 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 192 bp overlap
ChIP K562 ENCFF544PCK 192 bp overlap
ChIP K562 ENCFF830LLA 192 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP SK-N-SH ENCFF764OZD 192 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 178 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 123 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 157 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 76 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 192 bp overlap
ChIP DE DE-GATA4-2 192 bp overlap
ChIP foregut GSE117136.GATA4.foregut 192 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 192 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 192 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 192 bp overlap
ChIP DE DE-GATA6-1 192 bp overlap
ChIP DE DE-GATA6-2 192 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 192 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 192 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 192 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 192 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 192 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 192 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 192 bp overlap
ChIP foregut GSE117136.GATA6.foregut 192 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 192 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 192 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 192 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 192 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 192 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF304IEJ 96 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 89 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 192 bp overlap
ChIP K562 ENCFF744ALD 192 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 192 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 190 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 107 bp overlap
ChIP K562 ENCFF128TYE 192 bp overlap
ChIP K562 ENCFF934ZRG 192 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 134 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 176 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 145 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR390VGH.MNT.K-562 173 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 95 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 192 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 181 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 182 bp overlap
ChIP K562 ENCFF236IUS 192 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 109 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 192 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 192 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 192 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 192 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 192 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 192 bp overlap
ChIP K562 ENCFF506JCB 192 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 192 bp overlap
ChIP K562 ENCFF690CFF 192 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 192 bp overlap
ChIP K562 ENCFF059YCJ 192 bp overlap
TAL1 4 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 182 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 157 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 144 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 161 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 192 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 192 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 192 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 192 bp overlap