chr6 : 100,456,716 100,456,855
139 bp 31 TFs 1 linked gene
This 139 bp open chromatin element is linked to SIM1 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SIM1 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:100,451,716 – 100,461,855
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 108 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 139 bp overlap
ChIP K-562 ENCSR782WRO.BMI1.K-562 139 bp overlap
BRD4 1 dataset
ChIP thyroid-cancer GSE114068.BRD4.thyroid-cancer 139 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 139 bp overlap
ChIP hESC GSE133412.CBX7.hESC 139 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 139 bp overlap
CTCF 1 dataset
ChIP neural ENCSR822CEA.CTCF.neural 139 bp overlap
ERG 1 dataset
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 139 bp overlap
ETS1 1 dataset
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 108 bp overlap
EZH2 13 datasets
ChIP GM23338 ENCFF613YON 139 bp overlap
ChIP H1 ENCFF232NZA 139 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 139 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 139 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 139 bp overlap
ChIP K-562 ENCSR000AQE.EZH2.K-562 139 bp overlap
ChIP astrocyte ENCFF365JTP 139 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 139 bp overlap
ChIP hepatocyte ENCFF118DKH 111 bp overlap
ChIP hepatocyte ENCFF118DKH 139 bp overlap
ChIP hepatocyte ENCFF552DZB 139 bp overlap
ChIP neural progenitor cell ENCFF018MKA 139 bp overlap
ChIP neural progenitor cell ENCFF472NFV 139 bp overlap
FOXA1 1 dataset
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 70 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT GSE90454.FOXA2.BJ1-hTERT 139 bp overlap
ChIP DE DE-FOXA2-1 130 bp overlap
ChIP DE DE-FOXA2-2 139 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 139 bp overlap
GATA4 3 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 139 bp overlap
ChIP DE DE-GATA4-1 52 bp overlap
ChIP DE DE-GATA4-2 139 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 52 bp overlap
ChIP DE DE-GATA6-2 139 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 139 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 111 bp overlap
JARID2 3 datasets
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 128 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 55 bp overlap
ChIP hESC GSE133412.JARID2.hESC 139 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 85 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 97 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 63 bp overlap
NFIC 1 dataset
ChIP K-562 ENCSR796ITY.NFIC.K-562 139 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 139 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 139 bp overlap
PHC1 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PHC1.HEK293T_PCGF2fl 139 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 119 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 88 bp overlap
RNF2 11 datasets
ChIP HEK293T_PCGF1352fl GSE119618.RNF2.HEK293T_PCGF1352fl 105 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.RNF2.HEK293T_PCGF1356fl 139 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.RNF2.HEK293T_PCGF1356fl_OHT 108 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 139 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.RNF2.HEK293T_PCGF135fl_OHT 139 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 139 bp overlap
ChIP HEK293T_RING1Bfl GSE119618.RNF2.HEK293T_RING1Bfl 139 bp overlap
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 139 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 139 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 51 bp overlap
ChIP hMSC_D10 GSE125166.RNF2.hMSC_D10 139 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 99 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 139 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 139 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 139 bp overlap
SUZ12 10 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 139 bp overlap
ChIP H1 ENCFF881NFR 139 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 139 bp overlap
ChIP HEK293T_PCGF1352fl_OHT GSE119618.SUZ12.HEK293T_PCGF1352fl_OHT 139 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 139 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 139 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 139 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 139 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 139 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 139 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 139 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 118 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 139 bp overlap