chr6 : 87,320,722 87,321,018
296 bp 41 TFs 2 linked genes
This 296 bp open chromatin element is linked to SMIM8 and GJB7 and is bound by 41 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SMIM8 1.6 kb Proximal Proximity
GJB7 8.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:87,315,722 – 87,326,018
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 296 bp overlap
ChIP K562 ENCFF938UXQ 296 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR155KHM.ARNT.K-562 203 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 222 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 277 bp overlap
ChIP K562 ENCFF963TXY 208 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 296 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 146 bp overlap
ChIP K562 ENCFF673OEZ 296 bp overlap
DMTF1 1 dataset
ChIP K562 ENCFF947QUY 222 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 281 bp overlap
EGR1 6 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 296 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 246 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 183 bp overlap
ChIP K562 ENCFF006PJY 212 bp overlap
ChIP K562 ENCFF113OPQ 296 bp overlap
ChIP K562 ENCFF895KGN 99 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 165 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 227 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 221 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 219 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 256 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000BKM.GATA2.K-562 190 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 234 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 155 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 296 bp overlap
ChIP K562 ENCFF744ALD 103 bp overlap
IKZF1 2 datasets
ChIP K562 ENCFF771OHZ 296 bp overlap
ChIP K562 ENCFF771OHZ 111 bp overlap
KDM1A 2 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 264 bp overlap
ChIP K562 ENCFF128TYE 270 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 212 bp overlap
NCOR1 3 datasets
ChIP K-562 ENCSR910JAI.NCOR1.K-562 243 bp overlap
ChIP K-562 ENCSR798ILC.NCOR1.K-562 256 bp overlap
ChIP K562 ENCFF788MPU 296 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 296 bp overlap
POLR3A 2 datasets
ChIP K562 ENCFF452GCM 283 bp overlap
ChIP K562 ENCFF452GCM 83 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 173 bp overlap
ChIP K562 ENCFF740YLK 243 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 124 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 226 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 274 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 296 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 296 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 232 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 295 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 296 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 209 bp overlap
ChIP K562 ENCFF059YCJ 294 bp overlap
TAL1 9 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 279 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 244 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 193 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 206 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 244 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 228 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 277 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 196 bp overlap
ChIP K562 ENCFF620GMX 187 bp overlap
TBP 3 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 220 bp overlap
ChIP K562 ENCFF901UYM 144 bp overlap
ChIP K562 ENCFF901UYM 78 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 296 bp overlap
ChIP K562 ENCFF931DJY 230 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 256 bp overlap
ChIP K562 ENCFF319QZT 296 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 296 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 275 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 231 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 204 bp overlap
ChIP K562 ENCFF877JCX 141 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 296 bp overlap
ChIP K562 ENCFF594VNM 161 bp overlap