chr6 : 52,331,911 52,332,244
333 bp 41 TFs 0 linked genes
This 333 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:52,326,911 – 52,337,244
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 163 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 116 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 217 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 197 bp overlap
BRD4 5 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 333 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 333 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 200 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 219 bp overlap
ChIP hESC GSE33281.BRD4.hESC 75 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 195 bp overlap
CEBPB 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 88 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 172 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 292 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 160 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 183 bp overlap
ESR1 18 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 333 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 109 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 132 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 333 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 313 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 198 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 333 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 333 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 333 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 333 bp overlap
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 304 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 333 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 324 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 214 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 230 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 267 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.ESR1.MCF-7_IL1b_45m 132 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 247 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCFF127ZDW 78 bp overlap
HOXB13 1 dataset
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 52 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 313 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 103 bp overlap
NFIC 2 datasets
ChIP Ishikawa ENCFF029AAD 299 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 201 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 248 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 136 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 313 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 232 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 218 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 261 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 99 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 101 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 273 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 203 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 117 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 190 bp overlap
RELA 1 dataset
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.RELA.THP-1_eGFP-Pam3csk-4h 94 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 202 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 137 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 205 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 299 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMARCA4 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 213 bp overlap
SMARCC1 1 dataset
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 162 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 317 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 333 bp overlap
TP53 1 dataset
ChIP IMR-90_SENES_SHLUC GSE42728.TP53.IMR-90_SENES_SHLUC 71 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 247 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF265CEM 333 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 171 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 65 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 262 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 53 bp overlap
ZNF41 2 datasets
ChIP HEK293 GSE76494.ZNF41.HEK293 277 bp overlap
ChIP K562 ENCFF693FMG 217 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 324 bp overlap
ZNF730 1 dataset
ChIP HEK293T GSE78099.ZNF730.HEK293T 83 bp overlap