chr6 : 51,594,611 – 51,595,368

757 bp 73 TFs 0 linked genes

This 757 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

73 transcription factors

ARRB1 1 dataset

ChIP LNCaP-C4-2 GSE55615.ARRB1.LNCaP-C4-2 130 bp overlap

ASCL1 2 datasets

Motif DE_36h DE_36h-ASCL1_MA1100.3 8 bp overlap

Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap

Ascl2 1 dataset

Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap

BRD3 1 dataset

ChIP K-562_DMSO GSE120715.BRD3.K-562_DMSO 62 bp overlap

BRD4 1 dataset

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 203 bp overlap

CREBBP 1 dataset

ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 278 bp overlap

EOMES 1 dataset

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

ERF::FIGLA 1 dataset

Motif DE_36h DE_36h-ERFFIGLA_MA1934.2 13 bp overlap

ERF::NHLH1 1 dataset

Motif DE_36h DE_36h-ERFNHLH1_MA1938.2 16 bp overlap

ERF::SREBF2 1 dataset

Motif DE_36h DE_36h-ERFSREBF2_MA1939.2 16 bp overlap

ESR1 1 dataset

ChIP MCF-7_E2 GSE86538.ESR1.MCF-7_E2 114 bp overlap

ETV1 1 dataset

Motif DE_36h DE_36h-ETV1_MA0761.3 9 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_36h DE_36h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

FIGLA 1 dataset

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 444 bp overlap

ChIP DE DE-FOXA2-2 478 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 171 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 478 bp overlap

ChIP DE DE-GATA4-2 487 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 396 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 534 bp overlap

ChIP DE DE-GATA6-2 514 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 309 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 252 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 428 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 448 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 318 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 370 bp overlap

ChIP foregut GSE117136.GATA6.foregut 325 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 403 bp overlap

HAND2 3 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 375 bp overlap

Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HLF 1 dataset

ChIP HepG2 ENCFF854JLR 224 bp overlap

IKZF2 1 dataset

Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_36h DE_36h-Ikzf3_MA1992.2 9 bp overlap

MGA 1 dataset

Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap

MGA::EVX1 1 dataset

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

MYOG 1 dataset

Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap

NHLH1 1 dataset

Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap

NHLH2 1 dataset

Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap

Neurod2 1 dataset

Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap

Nfatc2 1 dataset

Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap

Olig2 1 dataset

Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 191 bp overlap

PBX3 1 dataset

Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap

PLAGL2 1 dataset

Motif DE_48h DE_48h-PLAGL2_MA1548.2 8 bp overlap

PRDM1 1 dataset

Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap

RUNX3 1 dataset

Motif DE_36h DE_36h-RUNX3_MA0684.3 8 bp overlap

RXR 1 dataset

ChIP LS180 GSE31939.RXR.LS180 112 bp overlap

SIX2 3 datasets

Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap

Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap

Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 278 bp overlap

SMC1A 1 dataset

ChIP MCF-7 GSE115602.SMC1A.MCF-7 140 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 258 bp overlap

SOX2 2 datasets

ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 149 bp overlap

ChIP TT GSE46837.SOX2.TT 184 bp overlap

SREBF1 1 dataset

Motif DE_36h DE_36h-SREBF1_MA0829.3 10 bp overlap

STAT1::STAT2 1 dataset

Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap

Six4 3 datasets

Motif DE_36h DE_36h-Six4_MA2001.2 7 bp overlap

Motif DE_48h DE_48h-Six4_MA2001.2 7 bp overlap

Motif DE_60h DE_60h-Six4_MA2001.2 7 bp overlap

TBR1 1 dataset

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap

TBX18 1 dataset

Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap

TBX2 1 dataset

Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX21 1 dataset

Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap

TFAP2A 1 dataset

Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 1 dataset

Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 2 datasets

Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap

ChIP HCC1954 GSE126897.TFAP2C.HCC1954 147 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_36h DE_36h-TFAP4ETV1_MA1966.2 13 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_36h DE_36h-TFAP4FLI1_MA1967.2 14 bp overlap

TWIST1 2 datasets

Motif DE_48h DE_48h-TWIST1_MA1123.3 8 bp overlap

Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

Tcf12 1 dataset

Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap

ZEB1 1 dataset

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

ZNF143 1 dataset

ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap

ZNF692 1 dataset

Motif DE_48h DE_48h-ZNF692_MA1986.2 8 bp overlap

ZNF766 1 dataset

Motif DE_36h DE_36h-ZNF766_MA2098.1 9 bp overlap

ZNF93 1 dataset

Motif DE_36h DE_36h-ZNF93_MA1721.2 14 bp overlap