chr6 : 50,824,250 50,824,443
193 bp 34 TFs 0 linked genes
This 193 bp open chromatin element has no linked target genes and is bound by 34 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:50,819,250 – 50,829,443
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 193 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 169 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 193 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 193 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 193 bp overlap
BRD2 3 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 193 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 144 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 152 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 193 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 176 bp overlap
BRD4 6 datasets
ChIP BE2C GSE80151.BRD4.BE2C 193 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 190 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 106 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 193 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 193 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 193 bp overlap
CDK9 2 datasets
ChIP A-375_1726plus GSE128080.CDK9.A-375_1726plus 152 bp overlap
ChIP Kelly_DMSO GSE107126.CDK9.Kelly_DMSO 81 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 193 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 109 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 178 bp overlap
CTCF 3 datasets
ChIP GM23338 ENCFF531QOI 118 bp overlap
ChIP H9 ENCFF152GTF 112 bp overlap
ChIP osteocyte ENCFF929FPD 72 bp overlap
EZH2 7 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 193 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 148 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 169 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 161 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 193 bp overlap
ChIP hepatocyte ENCFF552DZB 193 bp overlap
ChIP neural progenitor cell ENCFF472NFV 193 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 55 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 133 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 140 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 193 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 193 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 142 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 193 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 190 bp overlap
MYCN 2 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 193 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 168 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 153 bp overlap
NANOG 4 datasets
ChIP WA01 ERP004238.NANOG.WA01 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 193 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 173 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 76 bp overlap
POLR2A 2 datasets
ChIP SK-N-MC ENCFF088IVG 193 bp overlap
ChIP SK-N-MC ENCFF088IVG 81 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 193 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 193 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 193 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 179 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 109 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 173 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 127 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 193 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 147 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 193 bp overlap
ChIP H1 ENCFF881NFR 116 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 149 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 105 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 51 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 193 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 167 bp overlap