chr6 : 12,287,229 – 12,287,342
113 bp 26 TFs 1 linked gene
This 113 bp open chromatin element is linked to EDN1 and is bound by 26 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
EDN1 3.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:12,282,229 – 12,292,342
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 84 bp overlap
ARID1A 2 datasets
ChIP MCF-7_DCDT GSE123284.ARID1A.MCF-7_DCDT 113 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 88 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 52 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 101 bp overlap
BRD4 4 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 113 bp overlap
ChIP HCC1937 GSE124748.BRD4.HCC1937 69 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 63 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 111 bp overlap
CTCF 66 datasets
ChIP 22Rv1 ENCFF466OXN 111 bp overlap
ChIP 22Rv1 ENCFF466OXN 111 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 113 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 113 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 113 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 91 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 80 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 64 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 113 bp overlap
ChIP A549 ENCFF669BWC 52 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 113 bp overlap
ChIP Calu3 ENCFF526MDS 70 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 84 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 108 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 62 bp overlap
ChIP H9 ENCFF152GTF 50 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 113 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 84 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 54 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 113 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 113 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 113 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 113 bp overlap
ChIP KMS-11 ENCFF853JKX 113 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 113 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 72 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 71 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 61 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 57 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 70 bp overlap
ChIP MM.1S ENCFF869JMQ 61 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 100 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 113 bp overlap
ChIP PC-9 ENCFF539ULB 113 bp overlap
ChIP Panc1 ENCFF056JQX 113 bp overlap
ChIP Panc1 ENCFF056JQX 113 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 113 bp overlap
ChIP RWPE2 ENCFF911IEE 113 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 113 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 88 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 106 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 92 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 52 bp overlap
ChIP WTC11 ENCFF658QVH 53 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 113 bp overlap
ChIP brain ENCFF685VRG 113 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 113 bp overlap
ChIP chondrocyte ENCFF134ORZ 71 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 113 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 89 bp overlap
ChIP endothelial cell ENCFF663LIE 113 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 113 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 113 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 112 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 64 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 113 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 113 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 113 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 106 bp overlap
ChIP nephron ENCFF411ACD 79 bp overlap
ChIP nephron ENCFF972IQB 54 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 62 bp overlap
ChIP placenta ENCFF029PHY 67 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 113 bp overlap
ChIP stomach ENCFF918GTC 60 bp overlap
ChIP upper lobe of left lung ENCFF170ORD 59 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 72 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 83 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 113 bp overlap
GRHL2 7 datasets
ChIP HBE GSE46194.GRHL2.HBE 99 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 85 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 82 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 113 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 76 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 82 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 106 bp overlap
HDAC1 1 dataset
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_4-OHT_clone14 113 bp overlap
JUND 1 dataset
ChIP T-47D ENCSR000BVO.JUND.T-47D 97 bp overlap
KDM5B 1 dataset
ChIP SUM185 GSE46055.KDM5B.SUM185 113 bp overlap
MAZ 1 dataset
ChIP MCF-7 ENCSR288IJC.MAZ.MCF-7 113 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 113 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 79 bp overlap
RAD21 1 dataset
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 101 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 113 bp overlap
RELA 3 datasets
ChIP 786-O GSE86092.RELA.786-O 113 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 53 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 113 bp overlap
SIN3A 1 dataset
ChIP Panc1 ENCFF898EEQ 60 bp overlap
SMAD3 2 datasets
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 113 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 78 bp overlap
SMARCA4 4 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 104 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 89 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 55 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 92 bp overlap
SMARCB1 4 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 113 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 61 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 90 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 105 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 62 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 60 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 52 bp overlap
ZNF444 1 dataset
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 113 bp overlap
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