chr6 : 6,317,929 6,318,622
693 bp 40 TFs 1 linked gene
This 693 bp open chromatin element is linked to F13A1 and is bound by 40 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
F13A1 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:6,312,929 – 6,323,622
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 100 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 78 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 158 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 269 bp overlap
BRD4 2 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 587 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 147 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 312 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 517 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 314 bp overlap
CTCF 2 datasets
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 136 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 192 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 116 bp overlap
ChIP BLaER1 ENCFF262VBH 307 bp overlap
ChIP BLaER1 ENCFF460KDD 195 bp overlap
ERG 2 datasets
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 300 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 238 bp overlap
ESR1 28 datasets
ChIP MCF-7 GSE45822.ESR1.MCF-7 170 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 153 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 100 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 149 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 187 bp overlap
ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 140 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 119 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 82 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 119 bp overlap
ChIP MCF-7_E2_TNF GSE59530.ESR1.MCF-7_E2_TNF 128 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 123 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 111 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 132 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 205 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 137 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 302 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 154 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 183 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 150 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 229 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 152 bp overlap
ChIP MDA-MB-134-VI_FI GSE109103.ESR1.MDA-MB-134-VI_FI 133 bp overlap
ChIP MDA-MB-231_45min GSE95121.ESR1.MDA-MB-231_45min 183 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 259 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 239 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 250 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 237 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 210 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_E2_talen GSE94493.ESR1_Y537N.MCF-7_E2_talen 106 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 135 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 170 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 253 bp overlap
EZH2 5 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 346 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 572 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 112 bp overlap
ChIP RL_CPI169-10d GSE134136.EZH2.RL_CPI169-10d 526 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 93 bp overlap
FOXA1 1 dataset
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 237 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 237 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 129 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 60 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 285 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 110 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 230 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 133 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 60 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 372 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 337 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 119 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 288 bp overlap
TBX5 1 dataset
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 62 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 92 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 146 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 137 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 227 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 329 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF282 1 dataset
Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap