chr5 : 171,318,003 171,318,466
463 bp 24 TFs 2 linked genes
This 463 bp open chromatin element is linked to ENSG00000275038 and TLX3 and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000275038 8.2 kb Proximal Proximity
TLX3 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:171,313,003 – 171,323,466
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 178 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 463 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 254 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 463 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 187 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 141 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 185 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 109 bp overlap
EZH2 15 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 100 bp overlap
ChIP GM23338 ENCFF613YON 163 bp overlap
ChIP GM23338 ENCFF886DXX 145 bp overlap
ChIP H1 ENCFF232NZA 463 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 77 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 222 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 463 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 74 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 183 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 152 bp overlap
ChIP myotube ENCFF857GWB 137 bp overlap
ChIP myotube ENCFF857GWB 337 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 290 bp overlap
ChIP neural progenitor cell ENCFF018MKA 381 bp overlap
ChIP neural progenitor cell ENCFF472NFV 463 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 463 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 77 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 238 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 296 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 463 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 161 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 463 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 243 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 127 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 136 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 232 bp overlap
RNF2 1 dataset
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 284 bp overlap
SMARCC1 1 dataset
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 227 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 370 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 405 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 170 bp overlap
SUZ12 2 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 378 bp overlap
ChIP H1 ENCFF881NFR 463 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 111 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 154 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 463 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 106 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 462 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 201 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 130 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 66 bp overlap