Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 284 bp overlap

ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 325 bp overlap

CBX8 1 dataset

ChIP K-562 ENCSR000ATW.CBX8.K-562 192 bp overlap

CTNNB1 2 datasets

ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 325 bp overlap

ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 325 bp overlap

EBF1 1 dataset

Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap

ETV7 1 dataset

Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 183 bp overlap

Ebf4 1 dataset

Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 315 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 324 bp overlap

GATA6 4 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 319 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 258 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 325 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 325 bp overlap

GCM1 1 dataset

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

GLIS1 1 dataset

Motif DE_12h DE_12h-GLIS1_MA0735.2 15 bp overlap

GLIS3 1 dataset

Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

JARID2 2 datasets

ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 207 bp overlap

ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 240 bp overlap

JUN 2 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 247 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 273 bp overlap

MED1 1 dataset

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 325 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCFF065NZG 308 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 178 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 325 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 325 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 147 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 325 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 325 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 322 bp overlap

ChIP hESC GSE20650.NANOG.hESC 277 bp overlap

NIPBL 3 datasets

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 276 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 325 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 249 bp overlap

NR2C2 1 dataset

Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap

Nr2F6 1 dataset

Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap

POU5F1 6 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 300 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 325 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 297 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 178 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 325 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 216 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 321 bp overlap

PRDM14 1 dataset

ChIP hESC GSE22767.PRDM14.hESC 320 bp overlap

Prdm15 1 dataset

Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap

RNF2 2 datasets

ChIP WA01 GSE104690.RNF2.WA01 315 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 325 bp overlap

SMAD2 3 datasets

ChIP hESC GSE29422.SMAD2.hESC 310 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 325 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 325 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 325 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 325 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 325 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 325 bp overlap

SMAD2_3 6 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 325 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 325 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 325 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 325 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 325 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 325 bp overlap

SMAD3 5 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 260 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 153 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 303 bp overlap

ChIP hESC_DIFF_D1 GSE75297.SMAD3.hESC_DIFF_D1 196 bp overlap

ChIP hESC_DIFF_D2 GSE75297.SMAD3.hESC_DIFF_D2 178 bp overlap

SMAD4 1 dataset

ChIP hESC GSE29422.SMAD4.hESC 287 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 325 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 325 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 325 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 325 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 301 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 325 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 325 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 290 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TEAD1 1 dataset

ChIP WTC11 ENCFF502QUV 325 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap

TFAP2B 1 dataset

Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap

TFAP2C 3 datasets

Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 325 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 227 bp overlap

TFAP2E 1 dataset

Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

TP53 1 dataset

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 315 bp overlap

ZNF281 1 dataset

ChIP WTC11 ENCFF551GAV 325 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

ZNF692 1 dataset

Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap

ZNF784 1 dataset

Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap

Znf423 1 dataset

Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap

Genome Browser