chr5 : 119,445,650 119,445,886
236 bp 37 TFs 2 linked genes
This 236 bp open chromatin element is linked to RNA5SP190 and HSD17B4 and is bound by 37 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
RNA5SP190 at TSS At TSS Proximity
HSD17B4 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:119,440,650 – 119,450,886
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 167 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 173 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 137 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 193 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 142 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 214 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 236 bp overlap
E2F1 2 datasets
ChIP HeLa GSE22478.E2F1.HeLa 161 bp overlap
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 161 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 169 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 146 bp overlap
FEZF2 1 dataset
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 172 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 81 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 81 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 236 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 129 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 236 bp overlap
ChIP K562 ENCFF771OHZ 236 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 119 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 236 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 206 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 219 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 165 bp overlap
RAD21 2 datasets
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 59 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 127 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 180 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 167 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 197 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 157 bp overlap
SIX5 1 dataset
ChIP WA01 ENCSR000BIQ.SIX5.WA01 153 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 236 bp overlap
ChIP K-562 GSE55306.TBP.K-562 175 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 179 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 119 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 134 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 236 bp overlap
THAP1 1 dataset
ChIP K-562 ENCSR000BNN.THAP1.K-562 112 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 136 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 236 bp overlap
ZNF143 5 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 235 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 236 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 217 bp overlap
ChIP WTC11 ENCFF249JUK 236 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 226 bp overlap