chr1 : 94,929,767 94,930,139
372 bp 38 TFs 2 linked genes
This 372 bp open chromatin element is linked to CNN3-DT and CNN3 and is bound by 38 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CNN3-DT 2.4 kb Proximal Proximity
CNN3 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:94,924,767 – 94,935,139
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 139 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 193 bp overlap
BRD4 1 dataset
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 200 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 68 bp overlap
ChIP BLaER1 ENCFF896HSY 334 bp overlap
E2F6 1 dataset
ChIP H1 ENCFF785DWK 170 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 135 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 83 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 80 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 198 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 224 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 206 bp overlap
ChIP HepG2 ENCFF479OHI 226 bp overlap
ChIP HepG2 ENCFF507HCX 293 bp overlap
ChIP WTC11 ENCFF223QFY 190 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 353 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCFF683ZWN 51 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 77 bp overlap
NR2F2 1 dataset
ChIP liver ENCFF565JGD 118 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 251 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 136 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 287 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 212 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 107 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 284 bp overlap
ZFX 3 datasets
ChIP HEK293T ENCFF402JZW 306 bp overlap
ChIP HEK293T ENCFF402JZW 372 bp overlap
ChIP HepG2 ENCFF016NZF 94 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 126 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZNF136 1 dataset
ChIP HepG2 ENCFF188PQX 364 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 354 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 332 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 169 bp overlap
ZNF331 1 dataset
Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 132 bp overlap
ZNF501 2 datasets
ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 282 bp overlap
ChIP HepG2 ENCFF879XZR 372 bp overlap
ZNF547 1 dataset
ChIP HepG2 ENCFF834XWI 321 bp overlap
ZNF580 1 dataset
ChIP HEK293 ENCFF906MQV 74 bp overlap
ZNF598 1 dataset
ChIP HepG2 ENCFF356UIO 302 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCFF282RUS 59 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 353 bp overlap
ChIP HepG2 ENCFF653WIX 372 bp overlap
ZNF692 3 datasets
ChIP HEK293 ENCFF040AZE 96 bp overlap
ChIP HEK293 ENCFF040AZE 295 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 88 bp overlap
ZNF816 1 dataset
ChIP HepG2 ENCFF294VPD 137 bp overlap
Zic2 2 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap