chr5 : 90,057,353 90,057,680
327 bp 40 TFs 0 linked genes
This 327 bp open chromatin element has no linked target genes and is bound by 40 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:90,052,353 – 90,062,680
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
40 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 142 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 302 bp overlap
CTCF 4 datasets
ChIP chondrocyte ENCFF134ORZ 306 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 165 bp overlap
ChIP osteocyte ENCFF929FPD 257 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 208 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 203 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 205 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 173 bp overlap
FOXA1 1 dataset
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 207 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 236 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 155 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 182 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 272 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 167 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 295 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 249 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 262 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 188 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 317 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 271 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 296 bp overlap
NR6A1 1 dataset
Motif DE_12h DE_12h-NR6A1_MA1541.2 14 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 132 bp overlap
POU5F1 2 datasets
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 184 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 159 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 286 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 131 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 327 bp overlap
REST 1 dataset
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 280 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 57 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 194 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 217 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 158 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 156 bp overlap
TEAD4 4 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 208 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 242 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 215 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 298 bp overlap
YY1AP1 2 datasets
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 278 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 238 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap