chr5 : 88,819,417 88,819,646
229 bp 26 TFs 0 linked genes
This 229 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:88,814,417 – 88,824,646
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP GM12878 ENCFF831TWO 199 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO-PMA GSE138084.BRD2.THP-1_DMSO-PMA 209 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD2.THP-1_iBET-BD2-PMA 132 bp overlap
BRD4 13 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 159 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 229 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 229 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 75 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 111 bp overlap
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 229 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 229 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 163 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 229 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 229 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 139 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 176 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 229 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 228 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 68 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 174 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF753XDO 229 bp overlap
ChIP GM12878 ENCFF824TGK 229 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 226 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 202 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 200 bp overlap
KMT2A 5 datasets
ChIP ML-2_DMSO-D3 GSE127507.KMT2A.ML-2_DMSO-D3 53 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 229 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 146 bp overlap
ChIP RS4-11_DMSO-D3-180402 GSE127507.KMT2A.RS4-11_DMSO-D3-180402 229 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 108 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 91 bp overlap
MEN1 5 datasets
ChIP ML-2_DMSO-180619 GSE127507.MEN1.ML-2_DMSO-180619 191 bp overlap
ChIP MOLM-13 GSE149183.MEN1.MOLM-13 114 bp overlap
ChIP MOLM-13_EPZ5676 GSE149183.MEN1.MOLM-13_EPZ5676 102 bp overlap
ChIP MOLM-13_compound10 GSE149183.MEN1.MOLM-13_compound10 73 bp overlap
ChIP SEM GSE83671.MEN1.SEM 214 bp overlap
MLLT1 2 datasets
ChIP MOLM-13 GSE82116.MLLT1.MOLM-13 150 bp overlap
ChIP MV4-11 GSE82116.MLLT1.MV4-11 214 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 88 bp overlap
POLR2A 3 datasets
ChIP GM12878 ENCFF412KAE 229 bp overlap
ChIP GM12878 ENCFF899QYP 173 bp overlap
ChIP GM12891 ENCFF379FCI 229 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 196 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 124 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 229 bp overlap
RNF2 1 dataset
ChIP A-549 ENCSR798EGJ.RNF2.A-549 218 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 229 bp overlap
SPI1 7 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 205 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 194 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 130 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 165 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 135 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 77 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 118 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 134 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 130 bp overlap
ZBTB40 3 datasets
ChIP GM12878 ENCFF346DYM 189 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 222 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 74 bp overlap