chr5 : 84,494,421 84,495,074
653 bp 39 TFs 0 linked genes
This 653 bp open chromatin element has no linked target genes and is bound by 39 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:84,489,421 – 84,500,074
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 165 bp overlap
BRD2 3 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 291 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 247 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 453 bp overlap
BRD4 4 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 574 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 256 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 335 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 132 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 297 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 240 bp overlap
FOS 3 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 271 bp overlap
ChIP IMR-90 ENCFF179EDA 297 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 257 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 184 bp overlap
FOSL2 4 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 197 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 269 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 317 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 139 bp overlap
GATA2 1 dataset
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 472 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 137 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 190 bp overlap
HNRNPK 6 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 245 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 246 bp overlap
ChIP HepG2 ENCFF493GNS 139 bp overlap
ChIP HepG2 ENCFF493GNS 384 bp overlap
ChIP HepG2 ENCFF826MXP 153 bp overlap
ChIP HepG2 ENCFF826MXP 384 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 276 bp overlap
JUN 2 datasets
ChIP BT-549 GSE46166.JUN.BT-549 188 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 394 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 126 bp overlap
KDM5B 3 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 134 bp overlap
ChIP SUM159 GSE46055.KDM5B.SUM159 119 bp overlap
ChIP SUM185 GSE46055.KDM5B.SUM185 139 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 154 bp overlap
MED1 4 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 232 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 251 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 224 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 301 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 126 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 227 bp overlap
PCBP2 1 dataset
ChIP K562 ENCFF739EZC 343 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 104 bp overlap
RAD21 2 datasets
ChIP IMR-90 ENCFF752PTH 237 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 220 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 131 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 244 bp overlap
SMAD3 2 datasets
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 188 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 317 bp overlap
SMARCA2 3 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 340 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 255 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 385 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 145 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 213 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 207 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 140 bp overlap
SS18-SSX 3 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 418 bp overlap
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 213 bp overlap
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 235 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 256 bp overlap
USF2 2 datasets
ChIP IMR-90 ENCFF438KUN 257 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 207 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 278 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 352 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 202 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 83 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 208 bp overlap