Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

42 transcription factors

AR 1 dataset

ChIP LNCaP GSE117430.AR.LNCaP 191 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 124 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 177 bp overlap

BRD4 3 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 143 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 499 bp overlap

ChIP hESC GSE33281.BRD4.hESC 112 bp overlap

CHD1 1 dataset

ChIP WA01 ENCSR000AQK.CHD1.WA01 152 bp overlap

CHD7 1 dataset

ChIP H1 ENCFF126NLU 141 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 227 bp overlap

CTCF 2 datasets

ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 156 bp overlap

ChIP hiPSC GSE115407.CTCF.hiPSC 233 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF093OYK 340 bp overlap

ChIP BLaER1 ENCFF262VBH 345 bp overlap

EBF3_P177L 1 dataset

ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 247 bp overlap

ESR1 3 datasets

ChIP MCF-7_E2 GSE73956.ESR1.MCF-7_E2 222 bp overlap

ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 136 bp overlap

ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 252 bp overlap

ESR1_Y537N 2 datasets

ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 260 bp overlap

ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 156 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 216 bp overlap

GATA3 1 dataset

ChIP Kelly GSE94822.GATA3.Kelly 192 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 281 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 473 bp overlap

JUN 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 184 bp overlap

JUNB 1 dataset

ChIP Karpas-299 GSE151413.JUNB.Karpas-299 275 bp overlap

KLF4 1 dataset

ChIP HAP1 GSE130417.KLF4.HAP1 121 bp overlap

MAZ 1 dataset

ChIP HEK293 GSE76494.MAZ.HEK293 213 bp overlap

MED1 2 datasets

ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 110 bp overlap

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 175 bp overlap

MYCN 2 datasets

ChIP Kelly GSE94822.MYCN.Kelly 159 bp overlap

ChIP Kelly GSE94822.MYCN.Kelly 207 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 109 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 177 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 117 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 114 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 156 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 54 bp overlap

NFYB 1 dataset

ChIP HeLa-S3 ENCSR000DNR.NFYB.HeLa-S3 225 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 243 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 295 bp overlap

ChIP H1 ENCFF566JSR 438 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 208 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 519 bp overlap

RAD21 1 dataset

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 247 bp overlap

RARA 1 dataset

ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 64 bp overlap

RFX5 15 datasets

ChIP A-549 ENCSR064LJN.RFX5.A-549 409 bp overlap

ChIP A549 ENCFF220PEX 307 bp overlap

ChIP A549 ENCFF220PEX 135 bp overlap

ChIP H1 ENCFF605EGG 369 bp overlap

ChIP HeLa-S3 ENCFF703XPB 96 bp overlap

ChIP HeLa-S3 ENCSR000ECX.RFX5.HeLa-S3 250 bp overlap

ChIP Hep-G2 ENCSR000EEA.RFX5.Hep-G2 212 bp overlap

ChIP HepG2 ENCFF065UQI 306 bp overlap

ChIP IMR-90 ENCFF886KPO 269 bp overlap

ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 192 bp overlap

ChIP MCF-7 ENCFF983ILY 330 bp overlap

ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 417 bp overlap

ChIP SK-N-SH ENCFF755HLO 239 bp overlap

ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 307 bp overlap

ChIP WA01 ENCSR000ECF.RFX5.WA01 270 bp overlap

SCRT1 2 datasets

ChIP HEK293 ENCFF513YVP 239 bp overlap

ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 233 bp overlap

SCRT2 2 datasets

ChIP HEK293 ENCFF711QQB 252 bp overlap

ChIP HEK293 ENCFF711QQB 514 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 94 bp overlap

SMAD2_3 1 dataset

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 118 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 357 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 143 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 257 bp overlap

TFAP2B 1 dataset

ChIP SK-N-SH ENCFF869XXQ 264 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 227 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 282 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 146 bp overlap

ZNF534 1 dataset

ChIP HEK293T GSE78099.ZNF534.HEK293T 395 bp overlap

Genome Browser