Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

33 transcription factors

AR 1 dataset

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 135 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 395 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 394 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 144 bp overlap

BCL11A 2 datasets

ChIP WA01 ENCSR000BIP.BCL11A.WA01 67 bp overlap

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 112 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 237 bp overlap

CDX2 1 dataset

ChIP LS180 GSE31939.CDX2.LS180 161 bp overlap

CHD7 3 datasets

ChIP H1 ENCFF126NLU 342 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 194 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 395 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 251 bp overlap

EP300 2 datasets

ChIP hESC GSE17917.EP300.hESC 190 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 268 bp overlap

HNF4A 1 dataset

ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 306 bp overlap

KDM4A 1 dataset

ChIP WA01 ENCSR000AVC.KDM4A.WA01 120 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 114 bp overlap

NANOG 9 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 395 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 395 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 145 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 162 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 395 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 395 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 395 bp overlap

ChIP hESC GSE18292.NANOG.hESC 127 bp overlap

ChIP hESC GSE18292.NANOG.hESC 76 bp overlap

NCOA1 1 dataset

ChIP LS180_125 GSE39277.NCOA1.LS180_125 120 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 350 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 368 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 395 bp overlap

RAD21 2 datasets

ChIP neural ENCSR198ZYJ.RAD21.neural 395 bp overlap

ChIP neural cell ENCFF564MOT 395 bp overlap

RBBP5 2 datasets

ChIP H1 ENCFF905HFL 395 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 321 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 395 bp overlap

Rarg 1 dataset

Motif DE_12h DE_12h-Rarg_MA0860.1 17 bp overlap

SMARCA4 3 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 306 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 395 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 316 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 179 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX2 5 datasets

ChIP HNSC GSE69479.SOX2.HNSC 395 bp overlap

ChIP hESC GSE18292.SOX2.hESC 95 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 337 bp overlap

ChIP hiPSC GSE67282.SOX2.hiPSC 395 bp overlap

ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 282 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 395 bp overlap

Sox6 1 dataset

Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap

TAF1 1 dataset

ChIP neural ENCSR000BTX.TAF1.neural 104 bp overlap

TEAD4 2 datasets

ChIP H1 ENCFF778PAX 70 bp overlap

ChIP hESC GSE99202.TEAD4.hESC 196 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 117 bp overlap

ZNF143 1 dataset

ChIP HeLa GSE39263.ZNF143.HeLa 229 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF684 1 dataset

Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap

Genome Browser