chr4 : 155,248,074 155,248,293
219 bp 52 TFs 0 linked genes
This 219 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:155,243,074 – 155,253,293
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP WA01 ENCSR000BIP.BCL11A.WA01 187 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 132 bp overlap
BRD2 1 dataset
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 219 bp overlap
BRD4 7 datasets
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 103 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 140 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 65 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 136 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 101 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 70 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 142 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 219 bp overlap
ChIP H1 ENCFF126NLU 219 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 203 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 219 bp overlap
CTCF 22 datasets
ChIP GM23338 ENCFF531QOI 219 bp overlap
ChIP GM23338 ENCFF772DML 161 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 193 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 135 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 171 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 120 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 147 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 144 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 161 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 169 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 181 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 202 bp overlap
ChIP PC-3 ENCFF487TUI 219 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 219 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 148 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 194 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 153 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 207 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 160 bp overlap
ChIP endodermal cell ENCFF471YCZ 219 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 136 bp overlap
Dmrt1 1 dataset
Motif ES_0h ES_0h-Dmrt1_MA1603.2 9 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 118 bp overlap
ESR1 29 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 180 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 147 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 135 bp overlap
ChIP Ishikawa GSE99905.ESR1.Ishikawa 80 bp overlap
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 203 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 219 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 165 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 219 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 203 bp overlap
ChIP Ishikawa_Dex_E2 GSE109891.ESR1.Ishikawa_Dex_E2 124 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 219 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 98 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 207 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 219 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 219 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 219 bp overlap
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 206 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 219 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 219 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 219 bp overlap
ChIP Ishikawa_EnhiE2 GSE99905.ESR1.Ishikawa_EnhiE2 205 bp overlap
ChIP Ishikawa_M1-66 GSE147141.ESR1.Ishikawa_M1-66 219 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 219 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 206 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 203 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 112 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 201 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 219 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 219 bp overlap
ESR2 1 dataset
Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GATA2 1 dataset
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 101 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 123 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 78 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 219 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 219 bp overlap
MYOD1 1 dataset
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
NANOG 7 datasets
ChIP H1 ENCFF747ZPQ 217 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 219 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 214 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 219 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 219 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 219 bp overlap
ChIP hESC GSE18292.NANOG.hESC 159 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 136 bp overlap
NR1I2 1 dataset
Motif ES_0h ES_0h-NR1I2_MA1533.2 15 bp overlap
NR2C1 1 dataset
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
POU5F1 1 dataset
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 219 bp overlap
POU6F2 1 dataset
Motif ES_0h ES_0h-POU6F2_MA0793.2 9 bp overlap
Prdm15 1 dataset
Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
RAD21 5 datasets
ChIP H1 ENCFF698EWO 208 bp overlap
ChIP H1 ENCFF967OJF 219 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 142 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 174 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 165 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 219 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 219 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 171 bp overlap
SCRT1 1 dataset
Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SMARCA4 1 dataset
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 219 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 133 bp overlap
SNAI2 1 dataset
Motif ES_0h ES_0h-SNAI2_MA0745.3 8 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX15 1 dataset
Motif ES_0h ES_0h-SOX15_MA1152.2 7 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 219 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 219 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 219 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 111 bp overlap
Sox1 1 dataset
Motif ES_0h ES_0h-Sox1_MA0870.1 15 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 196 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 129 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 219 bp overlap
ZBTB6 1 dataset
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZIC1 1 dataset
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 146 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap