chr4 : 144,358,326 144,359,076
750 bp 63 TFs 0 linked genes
This 750 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:144,353,326 – 144,364,076
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
BARX1 1 dataset
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF844FIP 181 bp overlap
DLX1 1 dataset
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_60h DE_60h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_60h DE_60h-Dlx5_MA1476.3 8 bp overlap
EN2 1 dataset
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
EZH2 3 datasets
ChIP OCI-LY3 ENCFF337OPQ 92 bp overlap
ChIP OCI-LY3 ENCFF337OPQ 299 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 671 bp overlap
FOXA1 1 dataset
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 141 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 750 bp overlap
ChIP DE DE-FOXA2-2 734 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 750 bp overlap
ChIP DE DE-GATA4-2 750 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 750 bp overlap
ChIP DE DE-GATA6-2 750 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 250 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 173 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 276 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 205 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 213 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 204 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 302 bp overlap
GBX1 1 dataset
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 122 bp overlap
HESX1 1 dataset
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA7 1 dataset
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 217 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 157 bp overlap
IRF4 1 dataset
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 95 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 221 bp overlap
LBX1 1 dataset
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
MAX 1 dataset
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 110 bp overlap
MSX1 1 dataset
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 69 bp overlap
Nobox 1 dataset
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 417 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 293 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 150 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 481 bp overlap
PRRX2 1 dataset
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
Prdm5 1 dataset
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RAX 1 dataset
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 157 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 66 bp overlap
RXRA 1 dataset
ChIP GM12878 ENCSR000BJD.RXRA.GM12878 123 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 349 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 174 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 546 bp overlap
SMARCB1 1 dataset
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 351 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 231 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 292 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 439 bp overlap
SPI1 1 dataset
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 106 bp overlap
SS18 2 datasets
ChIP SYO-1 GSE108025.SS18.SYO-1 419 bp overlap
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 193 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 750 bp overlap
TEAD4 1 dataset
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 124 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 161 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 206 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 104 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 120 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 104 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 191 bp overlap
ZNF707 3 datasets
ChIP HEK293 ENCFF249FMX 256 bp overlap
ChIP HEK293 ENCSR854IPI.ZNF707.HEK293 232 bp overlap
ChIP HEK293T GSE78099.ZNF707.HEK293T 145 bp overlap
ZNF768 1 dataset
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap