chr4 : 137,393,158 – 137,393,303
145 bp 46 TFs 0 linked genes
This 145 bp open chromatin element has no linked target genes and is bound by 46 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:137,388,158 – 137,398,303
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
46 transcription factors
Source
Cell type
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 145 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 145 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 105 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 144 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 145 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 145 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 145 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 145 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 145 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 95 bp overlap
ESR1 18 datasets
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 104 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 89 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 145 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 145 bp overlap
ChIP SUM44PE_ESR1_wildtype GSE100074.ESR1.SUM44PE_ESR1_wildtype 145 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 145 bp overlap
ChIP T-47D ENCSR000BKN.ESR1.T-47D 145 bp overlap
ChIP T-47D ENCSR000BJS.ESR1.T-47D 83 bp overlap
ChIP T-47D_CR3flp GSE99479.ESR1.T-47D_CR3flp 145 bp overlap
ChIP T-47D_flp-ctrl GSE99479.ESR1.T-47D_flp-ctrl 145 bp overlap
ChIP ZR751 ERP000783.ESR1.ZR751 145 bp overlap
ChIP ZR751 GSE72249.ESR1.ZR751 145 bp overlap
ChIP ZR751_E2 GSE72249.ESR1.ZR751_E2 145 bp overlap
ChIP ZR751_E2_TAM ERP000380.ESR1.ZR751_E2_TAM 145 bp overlap
ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 145 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 141 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 137 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 108 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 145 bp overlap
ESR1_Y537S 2 datasets
ChIP T-47D_E2 GSE94493.ESR1_Y537S.T-47D_E2 145 bp overlap
ChIP T-47D_dox_E2 GSE94493.ESR1_Y537S.T-47D_dox_E2 122 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 145 bp overlap
FOXA1 13 datasets
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 145 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 94 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 112 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 145 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 145 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 145 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 145 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 127 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 144 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 145 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 145 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 145 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 145 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 145 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 145 bp overlap
ChIP SK-N-SH ENCFF764OZD 145 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 122 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 104 bp overlap
GATA3 3 datasets
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 97 bp overlap
ChIP SK-N-SH ENCFF040SSB 145 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 119 bp overlap
GATA3_Cter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Cter.T-47D_CR3flp 139 bp overlap
GATA3_Nter 1 dataset
ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 145 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 145 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 145 bp overlap
GATA6 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 145 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 141 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 145 bp overlap
HOXB13 1 dataset
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 142 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 145 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 145 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 145 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 138 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 60 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 80 bp overlap
MEF2D 2 datasets
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 112 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 145 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 96 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 145 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 145 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 100 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 145 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 145 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 145 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 145 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 145 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 96 bp overlap
ChIP neural cell ENCFF564MOT 145 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 145 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 145 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 145 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 145 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 145 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 145 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 145 bp overlap
SMARCA4 5 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 145 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 145 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 145 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 145 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 145 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 145 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 145 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 82 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 145 bp overlap
TWIST1 3 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 108 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 137 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 108 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 132 bp overlap
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