chr4 : 136,183,615 – 136,183,920
305 bp 58 TFs 0 linked genes
This 305 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:136,178,615 – 136,188,920
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
CTCF 120 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 177 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 153 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 110 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 158 bp overlap
ChIP BE2C ENCFF757SRF 256 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 190 bp overlap
ChIP C4-2B ENCFF821XVN 305 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 131 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
ChIP DND-41 ENCFF913MRA 248 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 133 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 158 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 102 bp overlap
ChIP GM12872 ENCFF697BYI 242 bp overlap
ChIP GM12873 ENCFF711LOS 245 bp overlap
ChIP GM12875 ENCFF081UCQ 223 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 102 bp overlap
ChIP GM12878 ENCFF485TGR 213 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 128 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 106 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM23338 ENCFF531QOI 161 bp overlap
ChIP GM23338 ENCFF772DML 145 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 201 bp overlap
ChIP H1 ENCFF764RHO 266 bp overlap
ChIP H54 ENCFF255TVO 208 bp overlap
ChIP H9 ENCFF152GTF 241 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 152 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 131 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 217 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 193 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 182 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 209 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 181 bp overlap
ChIP HCT116 ENCFF209YMI 216 bp overlap
ChIP HEK293 ENCFF498RMM 216 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 201 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 121 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 264 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 155 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 105 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 102 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 220 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 146 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 173 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 218 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 110 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF127KUP 226 bp overlap
ChIP HepG2 ENCFF194VBQ 257 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 279 bp overlap
ChIP Jurkat GSE68976.CTCF.Jurkat 153 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 129 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 281 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 202 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 208 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 233 bp overlap
ChIP MCF-7 ENCFF139NQI 238 bp overlap
ChIP MCF-7 ENCFF162GNE 222 bp overlap
ChIP MCF-7 ENCFF198DQX 225 bp overlap
ChIP MCF-7 ENCFF414SZG 186 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 207 bp overlap
ChIP MCF-7 ENCFF844STM 181 bp overlap
ChIP MCF-7 ENCFF954TUV 190 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 128 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 170 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 152 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 181 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 133 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 104 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 113 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 194 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 116 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 202 bp overlap
ChIP NB4 ENCFF155DNY 211 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 126 bp overlap
ChIP OCI-LY1 ENCFF455ESK 305 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 304 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 233 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 208 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 163 bp overlap
ChIP PC-3 ENCFF487TUI 305 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 187 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 168 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 267 bp overlap
ChIP RWPE2 ENCFF911IEE 305 bp overlap
ChIP RWPE2 ENCFF911IEE 305 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 210 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 92 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 184 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 166 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 195 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 140 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 132 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 222 bp overlap
ChIP endodermal cell ENCFF471YCZ 225 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 291 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 154 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 183 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 186 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 156 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 228 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 149 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 151 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 129 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 201 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 137 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 184 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 197 bp overlap
ChIP neural progenitor cell ENCFF420RBO 290 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 167 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 126 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 115 bp overlap
FOXA1 1 dataset
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GATA1 1 dataset
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
NEUROD1 1 dataset
Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 13 datasets
ChIP H1 ENCFF698EWO 226 bp overlap
ChIP H1 ENCFF967OJF 235 bp overlap
ChIP HCT116 ENCFF568PEO 268 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 144 bp overlap
ChIP HepG2 ENCFF360ZSW 181 bp overlap
ChIP HepG2 ENCFF906QIS 217 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 139 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 158 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 121 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 129 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 219 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 205 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 155 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
STAG1 4 datasets
ChIP HCAEC GSE101921.STAG1.HCAEC 138 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 167 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 129 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 153 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
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