chr1 : 78,053,169 78,053,569
400 bp 35 TFs 1 linked gene
This 400 bp open chromatin element is linked to GIPC2 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GIPC2 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:78,048,169 – 78,058,569
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 183 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 122 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 183 bp overlap
CEBPB 1 dataset
ChIP K-562 ENCSR000EHE.CEBPB.K-562 182 bp overlap
CTCF 1 dataset
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 63 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 156 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
ETV1 1 dataset
ChIP K562 ENCFF389WTI 277 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 151 bp overlap
EZH2 2 datasets
ChIP SU-DHL-6 GSE45982.EZH2.SU-DHL-6 153 bp overlap
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 116 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR302AWT.FOXK2.K-562 289 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 183 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 150 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 164 bp overlap
ChIP erythroblast ENCFF867JAR 327 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 316 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 200 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 93 bp overlap
ChIP erythroid_R3R4 GSE43625.GATA1.erythroid_R3R4 69 bp overlap
GATA2 3 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 137 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 119 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 135 bp overlap
GATA6 1 dataset
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 296 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 267 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 73 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 170 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR113LAS.MTA2.K-562 170 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 143 bp overlap
STAT3 1 dataset
ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 142 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 186 bp overlap
TAL1 9 datasets
ChIP CD34 GSE52924.TAL1.CD34 170 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 152 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 143 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 103 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 173 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 103 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 162 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 198 bp overlap
TCF3 1 dataset
ChIP K562 ENCFF319QZT 202 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 257 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 400 bp overlap
ZFX 1 dataset
ChIP K-562 ENCSR920ASP.ZFX.K-562 129 bp overlap
ZIM3 1 dataset
ChIP HEK293T GSE78099.ZIM3.HEK293T 124 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCFF436CGE 78 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 122 bp overlap
ChIP K562 ENCFF547OSS 314 bp overlap