chr1 : 74,674,561 74,674,961
400 bp 79 TFs 1 linked gene
This 400 bp open chromatin element is linked to ERICH3 and is bound by 79 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ERICH3 769 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:74,669,561 – 74,679,961
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
CTCF 42 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 252 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 240 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 270 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 235 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 208 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 208 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 158 bp overlap
ChIP GM12864 ENCFF357DQE 218 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 160 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 136 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 120 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 170 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 153 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 190 bp overlap
ChIP GM12872 ENCFF697BYI 243 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 127 bp overlap
ChIP GM12873 ENCFF711LOS 212 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 202 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 147 bp overlap
ChIP GM12878 ENCFF217EAX 325 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCSR000AKB.CTCF.GM12878 214 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 187 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 133 bp overlap
ChIP H1 ENCFF764RHO 247 bp overlap
ChIP H9 ENCFF152GTF 122 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 232 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 85 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 172 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 155 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 111 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 153 bp overlap
ChIP K562 ENCFF598YSU 213 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 160 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 164 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 106 bp overlap
ChIP endodermal cell ENCFF471YCZ 280 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 400 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 158 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 150 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 315 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 101 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP ME-1 GSE46044.ELF1.ME-1 129 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELF3 4 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ChIP PDAC GSE64557.ELF3.PDAC 281 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 119 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 297 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 285 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 283 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 339 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
ChIP 501-mel GSE137522.MITF.501-mel 223 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 68 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 292 bp overlap
ChIP GM23338 ENCFF065NZG 79 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 195 bp overlap
ChIP H1 ENCFF747ZPQ 211 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 274 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 195 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 344 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 400 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 261 bp overlap
ChIP hESC GSE20650.NANOG.hESC 162 bp overlap
Nkx3-2 1 dataset
Motif DE_12h DE_12h-Nkx3-2_MA0122.4 10 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU5F1 2 datasets
ChIP GM23338 ENCFF333SNB 297 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 143 bp overlap
Plagl1 2 datasets
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 209 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 136 bp overlap
SMARCA4 1 dataset
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 287 bp overlap
SMARCC1 3 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 173 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 331 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 301 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 262 bp overlap
SPI1 12 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 189 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 367 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 196 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 191 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 214 bp overlap
ChIP GM12878 ENCFF134LCP 100 bp overlap
ChIP GM12891 ENCFF563IUT 234 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 227 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 124 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 158 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 196 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 146 bp overlap
SPIB 4 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 240 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 341 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 298 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 86 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 99 bp overlap
ZBTB11 1 dataset
Motif DE_12h DE_12h-ZBTB11_MA2329.1 9 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 119 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap