chr4 : 57,680,929 – 57,681,388

459 bp 52 TFs 0 linked genes

This 459 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

52 transcription factors

ATOH7 2 datasets

Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap

Motif DE_24h DE_24h-ATOH7_MA1468.1 10 bp overlap

Arid3a 2 datasets

Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap

Motif DE_24h DE_24h-Arid3a_MA0151.1 6 bp overlap

Atf3 1 dataset

Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap

BATF 1 dataset

Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap

BATF3 1 dataset

Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap

EOMES 2 datasets

Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap

Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap

FOSL1 1 dataset

Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap

FOXO1::ELF1 2 datasets

Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap

Motif DE_24h DE_24h-FOXO1ELF1_MA1953.2 13 bp overlap

GATA6 3 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 269 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 345 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 312 bp overlap

HOXB13 1 dataset

ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 213 bp overlap

Hic1 2 datasets

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

Motif DE_24h DE_24h-Hic1_MA0739.2 8 bp overlap

JUN::JUNB 1 dataset

Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 1 dataset

Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap

Jun 1 dataset

Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 2 datasets

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap

MXI1 2 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap

MZF1 2 datasets

Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap

Motif DE_24h DE_24h-MZF1_MA0056.3 8 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NR2C2 1 dataset

Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap

PBX3 1 dataset

Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 270 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 169 bp overlap

PKNOX1 1 dataset

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 309 bp overlap

PPARA::RXRA 1 dataset

Motif DE_24h DE_24h-PPARARXRA_MA1148.2 17 bp overlap

PPARD 1 dataset

Motif DE_24h DE_24h-PPARD_MA1550.2 14 bp overlap

RBPJ 2 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap

RFX1 2 datasets

Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap

Motif DE_24h DE_24h-RFX1_MA0509.3 16 bp overlap

RFX2 2 datasets

Motif DE_12h DE_12h-RFX2_MA0600.3 14 bp overlap

Motif DE_24h DE_24h-RFX2_MA0600.3 14 bp overlap

RFX3 2 datasets

Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap

Motif DE_24h DE_24h-RFX3_MA0798.3 16 bp overlap

RFX5 2 datasets

Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap

Motif DE_24h DE_24h-RFX5_MA0510.3 14 bp overlap

Rarg 1 dataset

Motif DE_24h DE_24h-Rarg_MA0859.2 15 bp overlap

Runx1 2 datasets

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

Motif DE_24h DE_24h-Runx1_MA0002.3 9 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPIB 2 datasets

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Motif DE_24h DE_24h-SPIB_MA0081.3 13 bp overlap

SREBF2 1 dataset

Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap

Spi1 2 datasets

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap

TBR1 2 datasets

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap

TBX18 2 datasets

Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap

Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap

TBX2 2 datasets

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap

TBX20 2 datasets

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap

TBX3 2 datasets

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap

Tbx6 2 datasets

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap

ZNF211 2 datasets

Motif DE_12h DE_12h-ZNF211_MA1974.2 10 bp overlap

Motif DE_24h DE_24h-ZNF211_MA1974.2 10 bp overlap

ZNF331 1 dataset

Motif DE_12h DE_12h-ZNF331_MA1726.2 10 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 176 bp overlap

ZNF558 2 datasets

Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap

Motif DE_24h DE_24h-ZNF558_MA2335.1 29 bp overlap

ZNF684 1 dataset

Motif DE_24h DE_24h-ZNF684_MA1600.2 14 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap