Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

39 transcription factors

BRD4 6 datasets

ChIP RH4 GSE83726.BRD4.RH4 165 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 165 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 165 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 165 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 138 bp overlap

ChIP hESC GSE33281.BRD4.hESC 115 bp overlap

BRF1 1 dataset

ChIP H9 GSE94418.BRF1.H9 105 bp overlap

CHD4 1 dataset

ChIP SCMC GSE155861.CHD4.SCMC 165 bp overlap

CTCF 11 datasets

ChIP RH4 GSE83726.CTCF.RH4 165 bp overlap

ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 134 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF235CPK 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF277CZQ 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF327VLN 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF327VLN 110 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF377YBQ 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF433UFM 109 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF442YDO 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF641PIN 165 bp overlap

ChIP dorsolateral prefrontal cortex ENCFF696ASB 165 bp overlap

ERF::NHLH1 1 dataset

Motif DE_12h DE_12h-ERFNHLH1_MA1938.2 16 bp overlap

ESR1 1 dataset

ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 165 bp overlap

EZH2 1 dataset

ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 165 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 165 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 165 bp overlap

HDAC3 1 dataset

ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 165 bp overlap

HNRNPH1 1 dataset

ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 150 bp overlap

JUND 1 dataset

ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap

KMT2A 1 dataset

ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 165 bp overlap

LMO2 1 dataset

ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 136 bp overlap

MED1 1 dataset

ChIP U-87MG GSE36354.MED1.U-87MG 165 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MYCN 1 dataset

ChIP RH4 GSE83726.MYCN.RH4 165 bp overlap

MYF5 1 dataset

ChIP Rh18 GSE84628.MYF5.Rh18 158 bp overlap

MYOD1 6 datasets

ChIP RD GSE137168.MYOD1.RD 160 bp overlap

ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 165 bp overlap

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 156 bp overlap

ChIP RH4 GSE83726.MYOD1.RH4 165 bp overlap

ChIP myoblast GSE50413.MYOD1.myoblast 131 bp overlap

ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 165 bp overlap

OLIG2 2 datasets

ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 163 bp overlap

ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 165 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 142 bp overlap

PKNOX1 1 dataset

Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 142 bp overlap

RAD21 4 datasets

ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 165 bp overlap

ChIP RH4 GSE83726.RAD21.RH4 165 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 94 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 165 bp overlap

RBBP4 2 datasets

ChIP RH5 GSE155861.RBBP4.RH5 148 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 165 bp overlap

RBPJ 3 datasets

ChIP GIC GSE79734.RBPJ.GIC 165 bp overlap

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 157 bp overlap

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 165 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 150 bp overlap

SIN3A 1 dataset

ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 104 bp overlap

SMARCA4 4 datasets

ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 153 bp overlap

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 165 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 165 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 165 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 137 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 146 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 165 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 165 bp overlap

ChIP RENVM GSE49404.SOX2.RENVM 165 bp overlap

SOX8 1 dataset

ChIP RH4 GSE116344.SOX8.RH4 165 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 165 bp overlap

TBP 2 datasets

ChIP H1 ENCFF859IIO 165 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 165 bp overlap

YY1 1 dataset

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 165 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 165 bp overlap

ZNF273 1 dataset

ChIP HEK293T GSE78099.ZNF273.HEK293T 165 bp overlap

ZNF483 1 dataset

ChIP HEK293T GSE78099.ZNF483.HEK293T 165 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Genome Browser