chr3 : 136,747,210 136,747,511
301 bp 35 TFs 2 linked genes
This 301 bp open chromatin element is linked to STAG1 and STAG1-DT and is bound by 35 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
STAG1 4.9 kb Proximal Proximity
STAG1-DT 5.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:136,742,210 – 136,752,511
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ATF3 4 datasets
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 109 bp overlap
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 141 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 301 bp overlap
ChIP K562 ENCFF604FPV 234 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 301 bp overlap
ChIP K562 ENCFF674KTF 301 bp overlap
BRD4 1 dataset
ChIP HCT-15 GSE73319.BRD4.HCT-15 301 bp overlap
CEBPA 7 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 138 bp overlap
ChIP MV4-11 GSE88746.CEBPA.MV4-11 301 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 94 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 128 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 92 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 144 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 100 bp overlap
CEBPB 17 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 140 bp overlap
ChIP H1 ENCFF871PTR 260 bp overlap
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 160 bp overlap
ChIP HCT116 ENCFF097OLY 301 bp overlap
ChIP HeLa-S3 ENCFF722WEG 265 bp overlap
ChIP Hep-G2 ENCSR000EEX.CEBPB.Hep-G2 113 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 105 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 190 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 179 bp overlap
ChIP K562 ENCFF189VBN 254 bp overlap
ChIP K562 ENCFF194QGF 280 bp overlap
ChIP K562 ENCFF584CTB 286 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 141 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 301 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 211 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 175 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 149 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF651CMK 301 bp overlap
ChIP K562 ENCFF783ADE 301 bp overlap
CHD4 1 dataset
ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 140 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 97 bp overlap
Cebpa 5 datasets
ChIP BLaER1 ENCFF093OYK 301 bp overlap
ChIP BLaER1 ENCFF262VBH 245 bp overlap
ChIP BLaER1 ENCFF274GAT 292 bp overlap
ChIP BLaER1 ENCFF364PUR 301 bp overlap
ChIP BLaER1 ENCFF460KDD 243 bp overlap
E2F1 1 dataset
ChIP K562 ENCFF191BFW 301 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 163 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 210 bp overlap
GATA6 1 dataset
ChIP DE_D2 S55-DE-d2-GATA6-exp2 232 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 171 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 186 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 299 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 228 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 231 bp overlap
NELFA 1 dataset
ChIP HeLa_1h_Flavo-35min-H2O2 GSE93931.NELFA.HeLa_1h_Flavo-35min-H2O2 198 bp overlap
NKX2-1 2 datasets
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 51 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 150 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 301 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 301 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 163 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 301 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 272 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 250 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 301 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 301 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 301 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 301 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 157 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 149 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 253 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 210 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 291 bp overlap
STAG1 2 datasets
ChIP OCI-AML-3 GSE111537.STAG1.OCI-AML-3 216 bp overlap
ChIP OCI-AML-3_deltaSTAG2 GSE111537.STAG1.OCI-AML-3_deltaSTAG2 250 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 268 bp overlap
ZNF121 2 datasets
ChIP HEK293 ENCFF839FUF 247 bp overlap
ChIP WTC11 ENCFF291API 161 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 274 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 301 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 198 bp overlap
ZNF362 2 datasets
ChIP HEK293 ENCFF436CGE 212 bp overlap
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 226 bp overlap
ZNF384 5 datasets
ChIP HEK293T ENCFF019DZX 188 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 289 bp overlap
ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 212 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 185 bp overlap
ChIP K562 ENCFF365NXQ 174 bp overlap