chr3 : 97,968,084 – 97,968,252
168 bp 35 TFs 1 linked gene
This 168 bp open chromatin element is linked to RIOX2 and is bound by 35 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RIOX2 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:97,963,084 – 97,973,252
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 160 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 128 bp overlap
CEBPB 2 datasets
ChIP K-562 ENCSR000EHE.CEBPB.K-562 151 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 156 bp overlap
CTCF 268 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 168 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 168 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 168 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 168 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 168 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 142 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 131 bp overlap
ChIP A549 ENCFF034FVO 168 bp overlap
ChIP A549 ENCFF182TCQ 168 bp overlap
ChIP A549 ENCFF434LUY 158 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 168 bp overlap
ChIP BE2C ENCFF757SRF 168 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 168 bp overlap
ChIP Caco-2 ENCFF934QYS 168 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 135 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 160 bp overlap
ChIP DND-41 ENCFF913MRA 168 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 105 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 148 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 168 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 168 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 168 bp overlap
ChIP GM06990 ENCFF471OQT 168 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 168 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 156 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 168 bp overlap
ChIP GM12864 ENCFF357DQE 168 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 163 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 100 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 131 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 153 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 111 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 145 bp overlap
ChIP GM12873 ENCFF711LOS 168 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 130 bp overlap
ChIP GM12875 ENCFF081UCQ 168 bp overlap
ChIP GM12878 ENCFF485TGR 168 bp overlap
ChIP GM12878 ENCFF511URZ 144 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 138 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 100 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 168 bp overlap
ChIP GM23338 ENCFF531QOI 168 bp overlap
ChIP GM23338 ENCFF772DML 166 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 168 bp overlap
ChIP H1 ENCFF230QSV 86 bp overlap
ChIP H1 ENCFF414GZI 168 bp overlap
ChIP H1 ENCFF764RHO 168 bp overlap
ChIP H54 ENCFF255TVO 168 bp overlap
ChIP H9 ENCFF152GTF 168 bp overlap
ChIP H9 ENCFF152GTF 101 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 168 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 158 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 168 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 168 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 168 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 143 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 168 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 168 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 168 bp overlap
ChIP HCT116 ENCFF003KHP 122 bp overlap
ChIP HCT116 ENCFF209YMI 168 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 155 bp overlap
ChIP HEK293 ENCFF498RMM 168 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 159 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 163 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 131 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 77 bp overlap
ChIP HeLa-S3 ENCFF565UFR 154 bp overlap
ChIP HeLa-S3 ENCFF626XQK 168 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 168 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 166 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 122 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 152 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 168 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 168 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 130 bp overlap
ChIP HepG2 ENCFF127KUP 168 bp overlap
ChIP HepG2 ENCFF194VBQ 168 bp overlap
ChIP HepG2 ENCFF348BUL 168 bp overlap
ChIP HepG2 ENCFF757EKU 168 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 149 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 168 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 168 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 168 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 168 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 168 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 165 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 133 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 146 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 108 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 145 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 147 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 139 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 168 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 107 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 163 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 113 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 142 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 164 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 166 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 147 bp overlap
ChIP K-562_Dox GSE92879.CTCF.K-562_Dox 168 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 168 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 143 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 132 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 166 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 168 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 128 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 168 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 168 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 168 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 168 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 111 bp overlap
ChIP K562 ENCFF082GOI 152 bp overlap
ChIP K562 ENCFF111MGE 168 bp overlap
ChIP K562 ENCFF400DFR 168 bp overlap
ChIP K562 ENCFF430KTH 168 bp overlap
ChIP K562 ENCFF598YSU 168 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 168 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 130 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 168 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 148 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 122 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 161 bp overlap
ChIP Loucy ENCFF359TVQ 168 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 168 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 168 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 168 bp overlap
ChIP MCF-7 ENCFF139NQI 168 bp overlap
ChIP MCF-7 ENCFF162GNE 168 bp overlap
ChIP MCF-7 ENCFF198DQX 91 bp overlap
ChIP MCF-7 ENCFF210JUZ 114 bp overlap
ChIP MCF-7 ENCFF414SZG 109 bp overlap
ChIP MCF-7 ENCFF424NQR 168 bp overlap
ChIP MCF-7 ENCFF494VXA 91 bp overlap
ChIP MCF-7 ENCFF844STM 168 bp overlap
ChIP MCF-7 ENCFF954TUV 111 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 164 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 144 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 168 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 168 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 148 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 168 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 168 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 164 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 168 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 117 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 168 bp overlap
ChIP MM.1S ENCFF869JMQ 168 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 168 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 151 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 162 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 168 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 145 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 111 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 168 bp overlap
ChIP PC-3 ENCFF487TUI 168 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 168 bp overlap
ChIP PC-9 ENCFF539ULB 168 bp overlap
ChIP Panc1 ENCFF056JQX 168 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 168 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 133 bp overlap
ChIP SK-N-SH ENCFF575DMG 168 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 168 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 159 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 117 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 116 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 168 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 114 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 137 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 168 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 125 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 149 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 103 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 168 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 168 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 168 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 160 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 168 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 99 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 168 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 127 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 168 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 168 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 168 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 153 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 105 bp overlap
ChIP breast epithelium ENCFF341QWO 168 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 168 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 168 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 168 bp overlap
ChIP chondrocyte ENCFF134ORZ 168 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 168 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 160 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 168 bp overlap
ChIP endodermal cell ENCFF471YCZ 168 bp overlap
ChIP endodermal cell ENCFF471YCZ 109 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 168 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 168 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 164 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 168 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 168 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 165 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 123 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 168 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 129 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 168 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 168 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 168 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 168 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 164 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 162 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 149 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 118 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 168 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 108 bp overlap
ChIP hESC GSE20650.CTCF.hESC 162 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 168 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 168 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 168 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 168 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 168 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 168 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 168 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 158 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 168 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 153 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 133 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 164 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 168 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 168 bp overlap
ChIP islet ERP004003.CTCF.islet 168 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 168 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 168 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 110 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 137 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 153 bp overlap
ChIP liver ENCFF895ERR 168 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 168 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 168 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 168 bp overlap
ChIP neural crest cell ENCFF182LWK 168 bp overlap
ChIP neural crest cell ENCFF182LWK 106 bp overlap
ChIP neural progenitor cell ENCFF420RBO 168 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 168 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 157 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 127 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 159 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 134 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 168 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 132 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 168 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 168 bp overlap
ChIP right lobe of liver ENCFF011NDG 168 bp overlap
ChIP right lobe of liver ENCFF250KSY 168 bp overlap
ChIP right lobe of liver ENCFF523SCB 168 bp overlap
ChIP right lobe of liver ENCFF956UTA 168 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 168 bp overlap
ChIP thyroid gland ENCFF748ICQ 168 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 168 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 168 bp overlap
ESR1 13 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 168 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 168 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 168 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 168 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 168 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 168 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 168 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 168 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 168 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 168 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 121 bp overlap
ChIP breast-cancer_S440-2187 GSE128018.ESR1.breast-cancer_S440-2187 63 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 123 bp overlap
FOXA1 5 datasets
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 142 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 168 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 130 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 73 bp overlap
ChIP liver ERP002306.FOXA1.liver 112 bp overlap
GTF2F1 2 datasets
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 134 bp overlap
ChIP Hep-G2 ENCSR382PVA.GTF2F1.Hep-G2 129 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 168 bp overlap
ChIP liver ENCFF449HPV 126 bp overlap
ChIP liver ERP002306.HNF4A.liver 141 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF374TCI 168 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 84 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 123 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 125 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 168 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ONECUT1 3 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 167 bp overlap
ChIP HepG2 ENCFF243FIR 168 bp overlap
ChIP liver ERP002306.ONECUT1.liver 168 bp overlap
RAD21 39 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 104 bp overlap
ChIP H1 ENCFF698EWO 157 bp overlap
ChIP H1 ENCFF967OJF 99 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 168 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 152 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 156 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 125 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 103 bp overlap
ChIP HepG2 ENCFF360ZSW 168 bp overlap
ChIP HepG2 ENCFF906QIS 168 bp overlap
ChIP HepG2 ENCFF963UBJ 168 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 101 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 106 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 166 bp overlap
ChIP K562 ENCFF169SQI 164 bp overlap
ChIP K562 ENCFF634XYR 118 bp overlap
ChIP MCF-7 ENCFF694KOM 168 bp overlap
ChIP MCF-7 ENCFF724VCQ 168 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 159 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 166 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 168 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 168 bp overlap
ChIP MDM GSE103477.RAD21.MDM 168 bp overlap
ChIP SK-N-SH ENCFF747MAS 168 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 133 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 168 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 168 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 167 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 168 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 148 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 168 bp overlap
ChIP hiPSC_IID12 GSE106870.RAD21.hiPSC_IID12 116 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 168 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 168 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 168 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 168 bp overlap
ChIP liver ENCFF485PAC 168 bp overlap
ChIP liver ENCFF522JHE 128 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 168 bp overlap
REST 1 dataset
ChIP K-562 ENCSR137ZMQ.REST.K-562 143 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 101 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 143 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 151 bp overlap
STAG1 4 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 155 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 150 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 168 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 168 bp overlap
TBX5 1 dataset
ChIP G296S_4 GSE85628.TBX5.G296S_4 168 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 98 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 109 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 115 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 124 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 156 bp overlap
ZBTB33 7 datasets
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 163 bp overlap
ChIP HepG2 ENCFF778UKV 168 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 168 bp overlap
ChIP K562 ENCFF427SDV 168 bp overlap
ChIP K562 ENCFF875HLX 168 bp overlap
ChIP MCF-7 ENCFF622BUU 101 bp overlap
ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 168 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 168 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 129 bp overlap
ZNF2 1 dataset
ChIP HEK293T GSE78099.ZNF2.HEK293T 168 bp overlap
ZNF44 1 dataset
ChIP HEK293T GSE78099.ZNF44.HEK293T 168 bp overlap
Huangfu Lab · Publications · Resources · Contact