chr1 : 53,462,792 53,463,129
337 bp 38 TFs 1 linked gene
This 337 bp open chromatin element is linked to DMRTB1 and is bound by 38 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
DMRTB1 3.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:53,457,792 – 53,468,129
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 294 bp overlap
BRD4 4 datasets
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 337 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 337 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 337 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 275 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 323 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 181 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 181 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 246 bp overlap
CTCF 1 dataset
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 195 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 171 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 312 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 277 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 83 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 78 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 185 bp overlap
ChIP DE DE-GATA4-2 337 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 231 bp overlap
ChIP DE DE-GATA6-2 184 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 136 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 337 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 192 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 236 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 281 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 337 bp overlap
MEF2D 1 dataset
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 191 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 265 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 253 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94782.MYCN.Kelly 179 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 249 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 187 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 189 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 200 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 225 bp overlap
PKNOX1 7 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 261 bp overlap
ChIP HEK293T ENCFF174WDB 337 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 227 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 337 bp overlap
ChIP K562 ENCFF236IUS 319 bp overlap
ChIP MCF-7 ENCFF116OCS 337 bp overlap
ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 221 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 142 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 337 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 262 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 286 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 238 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 281 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 157 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 250 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 157 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 321 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 98 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 98 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 275 bp overlap