chr2 : 187,865,042 187,865,889
847 bp 60 TFs 0 linked genes
This 847 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:187,860,042 – 187,870,889
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 412 bp overlap
BARX2 1 dataset
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 72 bp overlap
DRGX 1 dataset
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
DUXA 1 dataset
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
EMX1 1 dataset
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 317 bp overlap
EVX1 1 dataset
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
FOXA1 53 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 394 bp overlap
ChIP 22Rv1 GSE85558.FOXA1.22Rv1 175 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 425 bp overlap
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 329 bp overlap
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 356 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 350 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 189 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 391 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 216 bp overlap
ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 324 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 346 bp overlap
ChIP 22Rv1_TFS_Crispr-36 GSE123618.FOXA1.22Rv1_TFS_Crispr-36 203 bp overlap
ChIP 22Rv1_TFS_Crispr_WT3 GSE123618.FOXA1.22Rv1_TFS_Crispr_WT3 288 bp overlap
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 294 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 346 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 238 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 234 bp overlap
ChIP A1A3_EtOH GSE112491.FOXA1.A1A3_EtOH 169 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 406 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 373 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 439 bp overlap
ChIP HepG2 ENCFF207NVJ 243 bp overlap
ChIP HepG2 ENCFF361KNY 123 bp overlap
ChIP HepG2 ENCFF740VZW 224 bp overlap
ChIP Huh-7_ASYNC GSE39241.FOXA1.Huh-7_ASYNC 174 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 176 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 174 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 128 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 146 bp overlap
ChIP MCF-7 GSE60270.FOXA1.MCF-7 214 bp overlap
ChIP MCF-7_ARID1A-KO GSE140185.FOXA1.MCF-7_ARID1A-KO 222 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 251 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 139 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 188 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 181 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 307 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 259 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 394 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 175 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 203 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 192 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 187 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 162 bp overlap
ChIP T-47D_shRNF2_24h GSE137579.FOXA1.T-47D_shRNF2_24h 184 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 189 bp overlap
ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 190 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 237 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 306 bp overlap
ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 373 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 285 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 193 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 332 bp overlap
FOXA2 15 datasets
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 197 bp overlap
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 364 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 454 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 232 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 356 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 193 bp overlap
ChIP DE DE-FOXA2-1 680 bp overlap
ChIP DE DE-FOXA2-2 640 bp overlap
ChIP HepG2 ENCFF533COJ 190 bp overlap
ChIP HepG2 ENCFF570ABM 338 bp overlap
ChIP HepG2 ENCFF894AYY 148 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 283 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 489 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 272 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 487 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 232 bp overlap
FOXK1 2 datasets
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 193 bp overlap
ChIP HepG2 ENCFF635XWY 358 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 159 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 152 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 421 bp overlap
ChIP DE DE-GATA4-2 484 bp overlap
ChIP foregut GSE117136.GATA4.foregut 537 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 470 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 490 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 517 bp overlap
ChIP DE DE-GATA6-2 565 bp overlap
ChIP foregut GSE117136.GATA6.foregut 472 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 398 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 523 bp overlap
GSX1 1 dataset
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 118 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
HNF1A 4 datasets
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
ChIP Hep-G2 ENCSR800QIT.HNF1A.Hep-G2 373 bp overlap
ChIP HepG2 ENCFF352VYI 153 bp overlap
ChIP HepG2 ENCFF540TRC 425 bp overlap
HNF1B 6 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
ChIP H9 ERP004206.HNF1B.H9 276 bp overlap
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 226 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 468 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 367 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 483 bp overlap
HNRNPUL1 2 datasets
ChIP Hep-G2 GSE120104.HNRNPUL1.Hep-G2 252 bp overlap
ChIP Hep-G2 ENCSR183AXJ.HNRNPUL1.Hep-G2 269 bp overlap
HOXA1 1 dataset
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
HOXB2 1 dataset
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
ISX 1 dataset
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 283 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 252 bp overlap
Lhx4 1 dataset
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
MIXL1 1 dataset
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NKX6-2 1 dataset
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
PDX1 2 datasets
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 251 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 243 bp overlap
POU6F1 1 dataset
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
PRRX1 1 dataset
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
RAX2 1 dataset
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
SHOX 1 dataset
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 517 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 241 bp overlap
Shox2 1 dataset
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
TLX2 1 dataset
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
mix-a 1 dataset
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap