chr2 : 176,155,373 176,155,672
299 bp 30 TFs 1 linked gene
This 299 bp open chromatin element is linked to HOXD4 and is bound by 30 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HOXD4 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:176,150,373 – 176,160,672
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 299 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 299 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 178 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 299 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 286 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 161 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 223 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 299 bp overlap
EZH2 9 datasets
ChIP GM23338 ENCFF613YON 299 bp overlap
ChIP H1 ENCFF232NZA 299 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 235 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 145 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 229 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 50 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 263 bp overlap
ChIP neural progenitor cell ENCFF472NFV 299 bp overlap
ChIP neural progenitor cell ENCFF472NFV 299 bp overlap
JARID2 2 datasets
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 299 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 299 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 141 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 90 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 299 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 251 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 195 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 299 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 299 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 276 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 121 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 299 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 236 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 202 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 299 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 299 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 201 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 211 bp overlap
SMARCC1 3 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 299 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 58 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 70 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 255 bp overlap
SUZ12 3 datasets
ChIP H1 ENCFF881NFR 299 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 189 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 136 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 264 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 125 bp overlap
ZNF429 1 dataset
ChIP HEK293T GSE78099.ZNF429.HEK293T 154 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap