chr2 : 176,147,674 176,148,326
652 bp 42 TFs 1 linked gene
This 652 bp open chromatin element is linked to HOXD4 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HOXD4 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:176,142,674 – 176,153,326
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
BCOR 3 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 393 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 204 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 652 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 50 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 491 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 231 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 88 bp overlap
CBX2 2 datasets
ChIP HEK293T GSE34774.CBX2.HEK293T 293 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 88 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 153 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 361 bp overlap
CTCF 1 dataset
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 107 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 337 bp overlap
EZH2 19 datasets
ChIP GM23338 ENCFF613YON 79 bp overlap
ChIP GM23338 ENCFF613YON 530 bp overlap
ChIP GM23338 ENCFF886DXX 57 bp overlap
ChIP GM23338 ENCFF886DXX 250 bp overlap
ChIP H1 ENCFF232NZA 652 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 494 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 267 bp overlap
ChIP fibroblast of lung ENCFF479BAW 234 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP hESC GSE113817.EZH2.hESC 273 bp overlap
ChIP hepatocyte ENCFF118DKH 304 bp overlap
ChIP hepatocyte ENCFF552DZB 583 bp overlap
ChIP keratinocyte ENCFF070STK 571 bp overlap
ChIP keratinocyte ENCFF070STK 365 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 501 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 424 bp overlap
ChIP neural progenitor cell ENCFF018MKA 652 bp overlap
ChIP neural progenitor cell ENCFF472NFV 652 bp overlap
ChIP neural progenitor cell ENCFF472NFV 652 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 173 bp overlap
GABPA 1 dataset
ChIP RWPE-1 GSE29808.GABPA.RWPE-1 266 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 177 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 592 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 531 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 511 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 66 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 353 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 322 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 413 bp overlap
PCBP2 1 dataset
ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 152 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 194 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 448 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 169 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 166 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 117 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 187 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 73 bp overlap
ChIP H1 ENCFF239FFS 524 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 244 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 427 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 427 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 250 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 273 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 197 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 413 bp overlap
SUZ12 10 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 68 bp overlap
ChIP H1 ENCFF881NFR 652 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 194 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 122 bp overlap
ChIP K562 ENCFF397TBJ 314 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 421 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 535 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 652 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 472 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 193 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
ZNF264 1 dataset
ChIP HEK293 GSE76494.ZNF264.HEK293 156 bp overlap
ZNF281 2 datasets
ChIP HepG2 ENCFF585QNU 264 bp overlap
ChIP K-562 GSE121133.ZNF281.K-562 293 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 181 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 414 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 317 bp overlap
ZNF711 2 datasets
ChIP HEK293T GSE145160.ZNF711.HEK293T 277 bp overlap
ChIP HEK293T GSE145160.ZNF711.HEK293T 270 bp overlap
ZNF786 1 dataset
ChIP HEK293T GSE78099.ZNF786.HEK293T 79 bp overlap