chr2 : 33,419,655 – 33,420,117
462 bp 30 TFs 0 linked genes
This 462 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:33,414,655 – 33,425,117
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.AR.LNCaP_FENG_shFOXA1_Ethanol 151 bp overlap
ATF2 2 datasets
ChIP K-562 ENCSR869IUD.ATF2.K-562 152 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 121 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 371 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 322 bp overlap
CTCF 100 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 223 bp overlap
ChIP A549 ENCFF034FVO 261 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 126 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 182 bp overlap
ChIP GM23338 ENCFF531QOI 150 bp overlap
ChIP GM23338 ENCFF772DML 190 bp overlap
ChIP H1 ENCFF764RHO 268 bp overlap
ChIP H54 ENCFF255TVO 203 bp overlap
ChIP H9 ENCFF152GTF 342 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 167 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 198 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 237 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 295 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 143 bp overlap
ChIP HEK293 ENCFF498RMM 210 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 160 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 238 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 186 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 269 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 199 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 192 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 172 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 191 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 303 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 117 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 116 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 180 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 219 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 105 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 102 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 181 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 328 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 190 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 254 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 167 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 291 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 190 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 63 bp overlap
ChIP K562 ENCFF400DFR 207 bp overlap
ChIP K562 ENCFF430KTH 296 bp overlap
ChIP Loucy ENCFF359TVQ 336 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 199 bp overlap
ChIP MCF-7 ENCFF139NQI 227 bp overlap
ChIP MCF-7 ENCFF162GNE 198 bp overlap
ChIP MCF-7 ENCFF198DQX 210 bp overlap
ChIP MCF-7 ENCFF494VXA 210 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 169 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 296 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 150 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 144 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 248 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 124 bp overlap
ChIP OCI-LY1 ENCFF455ESK 329 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 219 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 254 bp overlap
ChIP Panc1 ENCFF056JQX 373 bp overlap
ChIP SK-N-SH ENCFF575DMG 229 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 325 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 163 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 170 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 178 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 122 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 169 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 214 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 213 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 125 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 224 bp overlap
ChIP chondrocyte ENCFF134ORZ 420 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 236 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 237 bp overlap
ChIP endodermal cell ENCFF471YCZ 204 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 163 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 227 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 255 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 223 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 216 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 271 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 98 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 201 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 214 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 187 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 182 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 235 bp overlap
ChIP heart left ventricle ENCFF244ZHV 315 bp overlap
ChIP heart left ventricle ENCFF354HOQ 348 bp overlap
ChIP heart left ventricle ENCFF354HOQ 366 bp overlap
ChIP heart left ventricle ENCFF548XHH 283 bp overlap
ChIP heart right ventricle ENCFF027ORH 353 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 208 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 205 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 163 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 157 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 241 bp overlap
ChIP nephron ENCFF589HXU 397 bp overlap
ChIP nephron ENCFF972IQB 344 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 178 bp overlap
ChIP osteocyte ENCFF929FPD 347 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 171 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 181 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 191 bp overlap
FOXM1 2 datasets
ChIP SK-N-SH ENCFF404RGX 355 bp overlap
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 157 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 226 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 187 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 100 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 104 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCFF285LXR 257 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 216 bp overlap
MGA 1 dataset
ChIP A-549_empty GSE112188.MGA.A-549_empty 57 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 187 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 261 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 329 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 227 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 152 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 286 bp overlap
RELA 3 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 300 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 236 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 134 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 187 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 281 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 62 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 362 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 282 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 87 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 153 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 242 bp overlap
STAT3 1 dataset
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 65 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 167 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0813.1 13 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 227 bp overlap
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